NA ----> NA

Intron 1 GTATGTTCTT ... TGAATTATAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	36	40	17	28
A2	36.17	15	7	10
A3	30.34	31	4	23
A4	42.86	20	13	17
A5	46.15	7	5	7
A6	0	33	0	0
A7	7.84	94	9	7
A8	8.23	106	6	13
A9	14.55	91	17	14
A10	7.57	116	5	14

>TRINITY_DN133797_c0_g2_i5 from sample A1 / Example spliced isoform

GAATATCTTCGCTTCGGATCTGATTGAGCAGCAGTTCTGCTTTTGATAAGCATTAAATTCACTCGCTCTGAGCGGAGACCACAGAAACAGAGGACATGACTGAATAACTTCGTTTCGGACCAGATTGAGCAGCAGTCCCTGCTTTTTATAAGCATTAAATCCAAACACTCTGGGCGGAGACCACAGAAACAGAGGACACA
ACTGAATATATTCGCTTCGAATCTGATTGAGCAGCGGTTCTGCTTTTGATAAGCATTAAATTCACTCGCTCTGAGCGGAGACCACAGAAACAGAGGACATGACTGAATAACTTCGTTTCGGACCAGATTGAGCAGCAGTCCCTGCTTTTTATAAGCATTAAATCCAAACACTCTGGTAAGTTCTTACCCCATACTTGGTA
TTTTTAAATTTTATTAAAAGGGGC

>TRINITY_DN133797_c0_g2_i4 from sample A1 / Example unspliced isoform:

GAATATCTTCGCTTCGGATCTGATTGAGCAGCAGTTCTGCTTTTGATAAGCATTAAATTCACTCGCTCTGAGCGGAGACCACAGAAACAGAGGACATGACTGAATAACTTCGTTTCGGACCAGATTGAGCAGCAGTCCCTGCTTTTTATAAGCATTAAATCCAAACACTCTGGGCGGAGACCACAGAAACAGAGGACACA
ACTGAATATATTCGCTTCGAATCTGATTGAGCAGCGGTTCTGCTTTTGATAAGCATTAAATTCACTCGCTCTGgtatgttcttaccctatacttgggatttcttttcttcatttcttttaaaggtaatatgaaccagggcagtgccattccccatttgcatgtgagggaattcgatggcttatctttgcttttgtaatga
attatagAGCGGAGACCACAGAAACAGAGGACATGACTGAATAACTTCGTTTCGGACCAGATTGAGCAGCAGTCCCTGCTTTTTATAAGCATTAAATCCAAACACTCTGGTAAGTTCTTACCCCATACTTGGTATTTTTAAATTTTATTAAAAGGGGC