sp|Q96323|LDOX_ARATH ----> Leucoanthocyanidin dioxygenase

Intron 1 GTATGTTCAT ... TGATTAGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	48.57	18	17	14.5
A2	60.87	9	14	8
A3	22.22	14	4	6
A4	24.96	19.5	6.5	2.5
A5	23.53	13	4	11.5
A6	26.32	28	10	6
A7	18.99	64	15	12.5
A8	27.03	54	20	6
A9	16.46	66	13	6.5
A10	7.19	71	5.5	9

>TRINITY_DN48328_c2_g4_i1 from sample A7 / Example spliced isoform

CCTCAGCCGAATCTGGTGGTAGTACTGGCTCCCCATTCTGATCCCAACGTCCTGATCATTATTCTTCATGACCAAACCCCGGGGCTGCAAATTCGCAAAGATGGAGCTCTGATTGATGTCCAGTGCGTTCCAGGCACTTTGGTTGTGAATATTGCTGATCATATGGAGATAGTGAGTAACGGGAAATACAAGAGCATTGA
ACGCAGGGGCGTGGTGCACAAGGATCGCTCAAGAATGTCATGGGCCGTGTTTTGAGCTCCACCGCGTGATGTGGTGCTCTTACGGTGTTTTGCGTTTCG

>TRINITY_DN48328_c2_g4_i2 from sample A7 / Example unspliced isoform:

CCTCAGCCGAATCTGGTGGTAGTACTGGCTCCCCATTCTGATCCCAACGTCCTGATCATTATTCTTCATGACCAAACCCCGGGGCTGCAAATTCGCAAAGATGGAGCTCTGATTGATGTCCAGTGCGTTCCAGGCACTTTGGTTGTGAATATTGCTGATCATATGGAGgtatgttcataataacgaccaatgtaagctta
gatccaatgctttaggaaagaagattgatgttactgtagtaggttaataagttgtatgttgattagcagATAGTGAGTAACGGGAAA

Intron 2 GTATGTTCAT ... TTGAACGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	77.27	5	17	17
A2	67.44	7	14	15
A3	42.86	16	4	20
A4	45.45	6	7	3
A5	69.7	5	4	19
A6	41.75	30	10	33
A7	41.86	50	15	57
A8	38.67	46	20	38
A9	39.57	42	13	42
A10	46	27	6	40

>TRINITY_DN45379_c0_g2_i2 from sample A8 / Example spliced isoform

TCCTCAGCCGAATCTGGTGGTAGTACTGGCTCCCCATTCTGATCCCAACGTCCTGATCATTATTCTTCATGACCAAACCCCGGGGCTGCAAATTCGCAAAGATGGAGCTCTGATTGATGTCCAGTGCGTTCCAGGCACTTTGGTTGTGAATATTGCTGATCATATGGAGGGGCGTGGTGCACAAGGATCGCTCAAGAATG
TCATGGGCCGTGTTTTGAGCTCCACCGCGTGATGTGGTGCTCTTACGGTGTTTTGCGTTTCGCCAGATGATCGCACAGAAGTTCGATGATGGGCAGGTAAAGGTAAGTATAT

>TRINITY_DN45379_c0_g2_i3 from sample A8 / Example unspliced isoform:

TCCTCAGCCGAATCTGGTGGTAGTACTGGCTCCCCATTCTGATCCCAACGTCCTGATCATTATTCTTCATGACCAAACCCCGGGGCTGCAAATTCGCAAAGATGGAGCTCTGATTGATGTCCAGTGCGTTCCAGGCACTTTGGTTGTGAATATTGCTGATCATATGGAGgtatgttcataataacgaccaatgtaagctt
agatccaatgctttaggaaagaagattgatgttactgtagtaggttaataagttgtatgttgattagcagatagtgagtaacgggaaatacaagagcattgaacgcagGGGCGTGGTGCACAAGGATCGCTCAAGAATGTCATGGGCCGTGTTTTGAGCTCCACCGCGTGATGTGGTGCTCTTACGGTGTTTTGCGTTTC
GCCAGATGATCGCACAGAAGTTCGATGATGGGCAGGTAAAGGTAAGTATAT