NA ----> NA
Intron 1 GTGATTACAG ... CCTTCTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 0 | 0.7 | 0.7 |
| A2 | 33.33 | 2 | 2 | 0 |
| A3 | 63.71 | 3.3 | 5 | 7 |
| A4 | 70.67 | 3.7 | 8.3 | 9.3 |
| A5 | 100 | 0 | 1 | 6 |
| A6 | 71.88 | 11.3 | 29.7 | 30 |
| A7 | 82.49 | 9 | 45.7 | 42.3 |
| A8 | 74.2 | 8.7 | 31.3 | 19.7 |
| A9 | 83.04 | 5.3 | 29.7 | 28 |
| A10 | 69.92 | 17.7 | 38.3 | 43.3 |
>TRINITY_DN44944_c1_g2_i2 from sample A8 / Example spliced isoformAGACGCTATCTCGACGTTCATAATCAAAGGATCCCCACTCACATCGCAATAATGGTTTCGGGGAATGTCACTGAGCTGAGATAGTTGTTCAACATGCGCGAGGGACGAAAGGGTGACAGAACACACGCAGGCTTTAAAGCTCCAGGGAAGATTGATAGCGGTATTATCAATGATCTTAATGCAGCTCAGAGCGTAAGGAA
GAAGCATCCAGGATCAAGTCTTTGCAATATGGGCGATTACAGTGCTGAGGGTTCGCCTGCGGCTCGCAGTTGGGTTCCTCCCGTGCCCCAGTGCCTGCGGTGCATAAAAAACTATCCGGAAGCACGAGGGCCTCACGAACCAGGATTTCAGAAAAGTTTATGCGTTATAGGAAGAGAGCCAGCTCAGAAAGAATTCAGTG
TCTTCGATCCACATATGGGGATGGACAGAGGCTCCAACACGGTTGAGGATTCAAATTTTTTAAAGGAAATACAGGATCAAATCAGACTGCTTCGTAGTGAAAACTTAGAGATGAAGAGGGCCCTTAATCTCCTCTTCTCTCTCGCACAAGCCACGCACTCTGAGGTTAAATGAGGTTAAATTATGCAGCAGTCAAGGACA
TGACAAGGTTACCGACCTGGGAGAAAAAGTGGATATTGTCTCTGCTATAAACATGGATATAAATTTCGATAATGTTAACAGTGGCATCAAAGCTGTAAAAACGAAAGTGGATCTTCTGAGGGATGACATTAGGCATTTTTTTACGGGCTTGAAAACTGGAGGAGGCTCGGTGAAAGGCAACTCTAAGGAACCTGTGATTT
GCAACCTCCCCAGGCATCAGGGGGTTCAGTACCAGAACTAATTCTGGACTCCTCGCTCATGTTTTTGGTTTTTGTAGCAGCTTTGCTCGCTGAAGCTCTCGTCCAACCATGTTATACGGTCTCTGCTCCAGGTTTCAGGGTTTTCTACTGCAGTGTCTCTTTACTAGGGTTTTTTTTGGAAACGAAATAGCAATGTTTCA
GAAGACCGCTCGGAAGGCAAAGATTTTTATTTTCCTCATCAATGTTTTATTTTTATGTTTTTCTCCTTGGACATGGACAATTTGTAAGGTGTTACAGTTTGCATAGATTAGGGAAGTTCCATCCGAAGAAAGGAGTTATGAGTTATGGACTCAGTCCTGTTGTGGGAGCAATCCTTCTCCCTTTTTTTTTTTTTTTTTTA
AACTA
>TRINITY_DN44944_c1_g2_i4 from sample A8 / Example unspliced isoform:AGACGCTATCTCGACGTTCATAATCAAAGGATCCCCACTCACATCGCAATAATGGTTTCGGGGAATGTCACTGAGCTGAGATAGTTGTTCAACATGCGCGAGGGACGAAAGGGTGACAGAACACACGCAGGCTTTAAAGCTCCAGGGAAGATTGATAGCGGTATTATCAATGATCTTAATGCAGCTCAGAGCGTAAGGAA
GAAGCATCCAGGATCAAGTCTTTGCAATATGGGCGATTACAGTGCTGAGGGTTCGCCTGCGGCTCGCAGTTGGGTTCCTCCCGTGCCCCAGTGCCTGCGGTGCATAAAAAACTATCCGGAAGCACGAGGGCCTCACGAACCAGGATTTCAGAAAAGTTTATGCGTTATAGGAAGAGAGCCAGgtgattacagacctcccg
gtaagcccttatggtcacgtttcttgcaatcttgattttcttggcaatgaaggaaaatggtaatccttctgcagCTCAGAAAGAATTCAGTGTCTTCGATCCACATATGGGGATGGACAGAGGCTCCAACACGGTTGAGGATTCAAATTTTTTAAAGGAAATACAGGATCAAATCAGACTGCTTCGTAGTGAAAACTTAG
AGATGAAGAGGGCCCTTAATCTCCTCTTCTCTCTCGCACAAGCCACGCACTCTGAGGTTAAATGAGGTTAAATTATGCAGCAGTCAAGGACATGACAAGGTTACCGACCTGGGAGAAAAAGTGGATATTGTCTCTGCTATAAACATGGATATAAATTTCGATAATGTTAACAGTGGCATCAAAGCTGTAAAAACGAAAGT
GGATCTTCTGAGGGATGACATTAGGCATTTTTTTACGGGCTTGAAAACTGGAGGAGGCTCGGTGAAAGGCAACTCTAAGGAACCTGTGATTTGCAACCTCCCCAGGCATCAGGGGGTTCAGTACCAGAACTAATTCTGGACTCCTCGCTCATGTTTTTGGTTTTTGTAGCAGCTTTGCTCGCTGAAGCTCTCGTCCAACC
ATGTTATACGGTCTCTGCTCCAGGTTTCAGGGTTTTCTACTGCAGTGTCTCTTTACTAGGGTTTTTTTTGGAAACGAAATAGCAATGTTTCAGAAGACCGCTCGGAAGGCAAAGATTTTTATTTTCCTCATCAATGTTTTATTTTTATGTTTTTCTCCTTGGACATGGACAATTTGTAAGGTGTTACAGTTTGCATAGAT
TAGGGAAGTTCCATCCGAAGAAAGGAGTTATGAGTTATGGACTCAGTCCTGTTGTGGGAGCAATCCTTCTCCCTTTTTTTTTTTTTTTTTTAAACTA