sp|Q94FL9|MB3R4_ARATH ----> Transcription factor MYB3R-4
Intron 1 GTGAGGTGTT ... GTTATGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 30.54 | 32.5 | 17 | 11 |
| A2 | 25.17 | 36 | 6 | 18 |
| A3 | 23.05 | 55.5 | 11 | 22 |
| A4 | 41.21 | 20.5 | 6 | 21 |
| A5 | 42.72 | 14.5 | 6 | 13 |
| A6 | 36.66 | 3.5 | 3 | 1 |
| A7 | 9.52 | 29 | 0 | 6 |
| A8 | 8.04 | 17.5 | 0 | 3 |
| A9 | 9.71 | 23.5 | 0 | 5 |
| A10 | 17.08 | 41.5 | 1 | 15 |
>TRINITY_DN116679_c1_g1_i2 from sample A1 / Example spliced isoformGTTAAGGCGATGAACGTTCGATTTTTATTCCAAATTTCTAACGGCAACCCCACTCTTCAAAATTTCTATCAAAATCCTCATCCTCCCCTCTCTCTCGCAGTAGCCACTCACCGTCGTCACGTCGCAGGATCGAATCCGCTCATCGCCAGGGCTAGTCAAATACTGCAACAGCATGCTTTTCGTTAGGGTTTCGACGGAGC
TCGGCTAATTAAACAGAGTTAAAGCGCGGCGTGCATACCTAAGAAGCTCAAGATAAGGGTCATTTTCAATGGGGCAGCTTTAGACTCTGTGTCTAGGAATAATAGCTCTGGATTGAGTTCCTACTTTATTTGTATATGCGCGTTTTAGCATTATTTTCAGTTCTTTTTATTTATTTATGGCGCTTTATTTAGCCAACGTT
CATTCATGCGGACAGGTGCACGGGAGAGCTTTTAGTCTATTTATAGTCCGTTGATCGGATTTGGCTTGTCTCCGGTTTGGGTTCCTTTGTTATCTTTTTTTCAAAGATTGAATTATTATTATTATTATGAGATGGTTCAGAGTTCTTAAGTTATATTTGAAACAGATCTGTGGATAGAGATTCTTGTTTGGGATAAATTC
AGAGGGTTTGAATTAGGGATATCTGGTTAGAAATTTAGCTGGGTGCCTATGTGGCACTGTGCTGAAAGCTGGTCGGTATAGTGGGTACGAGAATTGAACTTGCTAAGGGAGAGGAAGCAAAAATGGAAGTGGAACAGGAACCCCAACCTGGTTTGGAGATGGAAAGAGAGAAAGAAGTAGAATTAGAAGATACGAAGGAT
GTGAAAAAGGAAGCAGGACCGAAGCCGACGAAAAAAAGAAGGTCCGTGATGCTGAAGCTTAAGAAGGTGAAGGAAATTCCGAAGGAAGTTGAGCTGGAGATGGACAGTGAAGGGGAAGTAGAGAGGCCCATCGAAGGGAGAGGGGCAGGGGCAGAAGCAAAGATTATAAAATTGGAAGGTGAGAACGATGAAGCATGTGA
CAAAGCTAATGGAGATTCGGATGAAGCGCAGAGGCTACCACCTGTTCAGGGGCCAACAGGTGGCCCCACAAGGCGTTCATCTAAGGGGGGATGGACACTGGAAGAGGATGAAATTTTAAGGAGAGCTGTTCAATGTTATAATGGCAAAAATTGGAAGAAAATAGCTCAATTTTTTCCAGGCCGTACTGATGTGCAATGCT
TGCACCGGTGGCAGAAGGTTATCAACCCAAATCTTGTCAAAGGTCCTTGGACAAAGGAGGAAGATGAAAAGATAGTGGATCTTGTAAAAAGGCATGGGGCACAAAAGTGGTCTCTCATTTCACAGTCTGTGCCGGGTCGCATTGGAAAACAATGCCGTGAAAGGTGGTACAATCATTTAAACCCAGAAATAAAGAAAGAA
GCATGGACACAAGAGGAAGAGTTAGCTCTCATTCGTGCTCACCAGATATATGGGAACAAGTGGGCTGAAATCGCTAAGTATTTACCTGGAAGGACAGACAATGCAATAAAGAATCATTGGAACAGCTCAGCTAAAAGGAAGGTTGCTTCGTATTTGGCCACAGGCTTACTTACAGAGCTTCCTGATTTGCCTGCTTTCCG
TT
>TRINITY_DN116679_c1_g1_i8 from sample A1 / Example unspliced isoform:TTGGAACTACTAGCTCGGTGAAAATCTCACTAGAAAATGGATCTTTATGCACTTAGCAATCTCATGATTATTTCTTTCAACTCTTGCAGTGAGTTAATGTGTAAATTGGAAATTTGTGTTGTGGGAGAATCAAATTGAAAGGATATGGATAAATTTATGAAGCTAAAAACTATTTGTATTCCAGGATTAGTTGCATGCTA
GTATTGCCATAACTTGAAAAATCCTTCTAGTACATTATTCGGAAGTAGGACACTGGAGGAAGAGACCTATTGTAAATTTGTTTGAGGTCTGAGAAACTGGCTAGTAATTTTCAGTAACCTAGGTCATCTGCCAATCATTATCTTGTTGGCTGGCTGTTGGTCTGTTCATACTTGTGGATGGCCTTTCGCTTTTGTTCCTG
AAATTGTCAAATAGAAAATTTAGGAATCTCTGATTCCTTGCACCTCATTGATATGACTTTTTTTTATATTATATAATTACTTGTTCTGTTTACAATTTTGAATTAGTGGACTTCAAATGTTGCTTTGGTTTATATGTATATTCATCGACATTCCATTGTATCACCTTTTCCAAGCTAAGAGAGGTTGGACTTGGTTTATG
ATTGGTCCTTTTAAAAACTGAAAGTCTAGAGAAACCCGCATCAAACTATTCCAAGATACATTGTATTTTACGGGTTTTTGTTTTTGTAGCCAACAAGTTGTTTTACAGATACTTTTGTGTGTTGTGTGTCTGTATTTGGAATTTTGGGTTGATGTTATTAATAATCATTTGATTGACAGGCCAACAGGTGGCCCCACAAG
GCGTTCATCTAAGGGGGGATGGACACTGGAAGAGgtgaggtgtttcactcaaatttatatatattttgcctgttgtggaagatgatcagtatataacatgtcatcttatatgctttattgtttattgtcattatgtttttctggtaaaagaattaaagttacatctcatctaaatagagtttaaactttaatcatatctg
ggtcctactcatttgggctatcgttggagttttttgttctttgatatttgatagtctgttcatatttttaacaatgaacactagtgtcgagttacatgatttgttttctgatgaatatataacacttatgaaattggattgacttattttagcacactattttgtgatatctaaggtatcatacactaatctgaaaaata
ttgagttccgctctgagtagtgttatgttatactgttatggcagGATGAAATTTTAAGGAGAGCTGTTCAATGTTATAATGGCAAAAATTGGAAGAAAATAGCTCAATTTTTTCCAGGCCGTACTGATGTGCAATGCTTGCACCGGTGGCAGAAGGTTATCAACCCAAATCTTGTCAAAGGTCCTTGGACAAAGGAGGAA
GATGAAAAGATAGTGGATCTTGTAAAAAGGCATGGGGCACAAAAGTGGTCTCTCATTTCACAGTCTGTGCCGGGTCGCATTGGAAAACAATGCCGTGAAAGGTGGTACAATCATTTAAACCCAGAAATAAAGAAAGAAGCATGGACACAAGAGGAAGAGTTAGCTCTCATTCGTGCTCACCAGATATATGGGAACAAGTG
GGCTGAAATCGCTAAGTATTTACCTGGAAGGTATGTGTTTATTCAGTTTTGCTTATGTAAAGGAGATGAAATTGCTAAGATTGATGGGATTTCAATAAGATTTGAGGAACCCAACAGTGAATCACTAATTCCAGCAACAAGAAGGAAAATGAAACAGTTATGCATTATATTAGAATATTTTTCACCTCAACTTTGAAGTT
AGCATTTCTTGCATTGGTTGCACTCCATGCATATCTAACTAAATCTTTTAAATGGGAAAGAATGTTCCAGTTTGAACCAGTCTTTTTTGAAACTCCAACCAATGCTAGAGGTTTGGTTCTTTATAGATATCAATAGCAAATGATAGTAAGACTGACAAAGCTCCTATAACGATAGCTAGAAACAAAGGTTGCAGAAGGGG
AAAAGTAATATTGGCATTGTGATTGAGCTTATATTTCTTTACATATCTGGAAATAGGCACCATAGGAGAATGGATGTTTCGGATAAAGTTTCAGTTTAAAGAGGCAAAATATATTTCAGATATACATCTCTGCTTGTAGAATTGCCATTTCGGACTGATTGCTGTTTTGCAAATGCTTAGTTGGGAAACACTGAAAGTCT
GAAATAACATAGGACCAAACTCCAAAGATGGCCAAAGAAACAAGAATGGATACTTCAAAGATTGTCTAAAGGAGTAGAGTAAAAGATAGTGAATATTAACATGCAATTACATTATTTGTTGCAATTTTTTTAAAATGTTATGGTGTTATTGCATACAATAGGGCCCTTTTGCTAGGGGAAAAATGGAGGCACAAATAAAC
Intron 2 GTCTGTGAAA ... TCATCAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 11.11 | 56 | 6 | 8 |
| A2 | 15.79 | 32 | 5 | 7 |
| A3 | 12.38 | 46 | 7 | 6 |
| A4 | 26.76 | 26 | 8 | 11 |
| A5 | 11.76 | 15 | 2 | 2 |
| A6 | 16.67 | 5 | 0 | 2 |
| A7 | 5.08 | 28 | 1 | 2 |
| A8 | 4.76 | 20 | 1 | 1 |
| A9 | 0 | 15 | 0 | 0 |
| A10 | 0 | 31 | 0 | 0 |
>TRINITY_DN110748_c1_g4_i2 from sample A2 / Example spliced isoformTTTTATTCCAAATTTCTAACGGCAACCCCACTCTTCAAAATTTCTATCAAAATCCTCATCCTCCCCTCTCTCTCGCAGTAGCCACTCACCGTCGTCACGTCGCAGGATCGAATCCGCTCATCGCCAGGGCTAGTCAAATACTGCAACAGCATGCTTTTCGTTAGGGTTTCGACGGAGCTCGGCTAATTAAACAGAGTTAA
AGCGCGGCGTGCATACCTAAGAAGCTCAAGATAAGGGTCATTTTCAATGGGGCAGCTTTAGACTCTGTGTCTAGGAATAATAGCTCTGGATTGAGTTCCTACTTTATTTGTATATGCGCGTTTTAGCATTATTTTCAGTTCTTTTTATTTATTTATGGCGCTTTATTTAGCCAACGTTCATTCATGCGGACAGGTGCACG
GGAGAGCTTTTAGTCTATTTATAGTCCGTTGATCGGATTTGGCTTGTCTCCGGTTTGGGTTCCTTTGTTATCTTTTTTTCAAAGATTGAATTATTATTATTATTATGAGATGGTTCAGAGTTCTTAAGTTATATTTGAAACAGATCTGTGGATAGAGATTCTTGTTTGGGATAAATTCAGAGGGTTTGAATTAGGGATAT
CTGGTTAGAAATTTAGCTGGGTGCCTATGTGGCACTGTGCTGAAAGCTGGTCGGTATAGTGGGTACGAGAATTGAACTTGCTAAGGGAGAGGAAGCAAAAATGGAAGTGGAACAGGAACCCCAACCTGGTTTGGAGATGGAAAGAGAGAAAGAAGTAGAATTAGAAGATACGAAGGATGTGAAAAAGGAAGCAGGACCGA
AGCCGACGAAAAAAAGAAGGTCCGTGATGCTGAAGCTGAAGAAGGTGAAGGAAATTCCGAAGGAAGTTGAGCTGGAGATGGACAGTGAAGGGGAAGTAGAGAGGCCCATCGAAGGGAGAGGGGCAGGGGCAGAAGCAAAGATTATAAAATTGGAAGGTGAGAACGATGAAGCATGTGACAAAGCTAATGGAGATTCGGAT
GAAGCGCAGAGGCTACCACCTGTTCAGGGGCCAACAGGTGGCCCCACAAGGCGTTCATCTAAGGGGGGATGGACACTGGAAGAGGATGAAATTTTAAGGAGAGCTGTTCAATGTTATAATGGCAAAAATTGGAAGAAAATAGCTCAATTTTTTCCAGGCCGTACTGATGTGCAATGCTTGCACCGGTGGCAGAAGGTTAT
CAACCCAAATCTTGTCAAAGGTCCTTGGACAAAGGAGGAAGATGAAAAGATAGTGGATCTTGTAAAAAGGCATGGGGCACAAAAGTGGTCTCTCATTTCACAGTCTGTGCCGGGTCGCATTGGAAAACAATGCCGTGAAAGGTATTATTTAATGACAGTATGCTACTTGTGGTCATTTTTTTAATTTGGACTAATCAAGG
ATCTCTGCCACAAATTTGGACTTGATAAATCAGTGCCAAACAAAGCATATTATAGATATTGATAGTGCTGAAATTTTATGAATTCCAGAAACACATTCTCCACTAATAGCTGTATAATTTATCAAACTGACTTTCTTTCTTGTTCTTTTATGTTTTTTGATAAATGACTTTTTTTCTTATTGGTTTTCTGCATCCATGGC
AATTGACTGGTAAAATGTTCAGTGCCAAGTGCATTATGAAAGATGTTAAAGATTTTATTTGCTGATACCTTTTTGTTGGTATTTTACAAAATGTCACACACACCACATTTTGACCTTGTTAGCAAATATATATCAAATAACTATTGAAGGTGCATTGATGCTTGGACTCTAGAG
>TRINITY_DN110748_c1_g4_i3 from sample A2 / Example unspliced isoform:AAATGTTTCTCAGATGTTTCCAAGGCCTCTTTTTATCATTTCCATACGAAGTGATTCCTTGATTGAATCAAAGGGAAGACCAGATGCTTTGGTTATATGGTTTTTAAGTTTTAAGTTTTGTATTTTGTTTTAATTGTAAATTGATTTGCATGCTATACTATGATTGGAGTAGTCTATAGGTTGGTTTTATTTGTTGGAAG
GTATATTGATTAAAAGGTCTGAGTGTCAGTGAACTCTCATCCTTTTTTTGGTTTAACACATGTTTGGATTTTCCTTTGTAACTGTTCAGTTTGTTCTTAATCTCCTGAGCTGATATTGATATTGAATGTCTACAGCTCAATTTTTTCCAGGCCGTACTGATGTGCAATGCTTGCACCGGTGGCAGAAGGTTATCAACCCA
AATCTTGTCAAAGGTCCTTGGACAAAGGAGgtctgtgaaatctcagcttactattgaatcaggatggatgggatctagattctttgacggcattcattgttattatgtgttaatttcatttgcttgcctctcatcaacagGAAGATGAAAAGATAGTGGATCTTGTAAAAAGGCATGGGGCACAAAAGTGGTCTCTCATT
TCACAGTCTGTGCCGGGTCGCATTGGAAAACAATGCCGTGAAAGGTATTATTTAATGACAGTATGCTACTTGTGGTCATTTTTTTAATTTGGACTAATCAAGGATCTCTGCCACAAATTTGGACTTGATAAATCAGTGCCAAACAAAGCATATTATAGATATTGATAGTGCTGAAATTTTATGAATTCCAGAAACACATT
CTCCACTAATAGCTGTATAATTTATCAAACTGACTTTCTTTCTTGTTCTTTTATGTTTTTTGATAAATGACTTTTTTTCTTATTGGTTTTCTGCATCCATGGCAATTGACTGGTAAAATGTTCAGTGCCAAGTGCATTATGAAAGATGTTAAAGATTTTATTTGCTGATACCTTTTTGTTGGTATTTTACAAAATGTCAC
ACACACCACATTTTGACCTTGTTAGCAAATATATATCAAATAACTATTGAAGGTGCATTGATGCTTGGACTCTAGAG