sp|O22048|AOX1C_ARATH ----> Ubiquinol oxidase 1c, mitochondrial
Intron 1 GTCAGTAGTT ... TCCTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 4 | 1 |
| A2 | 80 | 2 | 4 | 12 |
| A3 | 50 | 1 | 1 | 1 |
| A4 | 100 | 0 | 3 | 1 |
| A5 | 33.33 | 1 | 0 | 1 |
| A6 | 16.13 | 13 | 5 | 0 |
| A7 | 42.86 | 12 | 8 | 10 |
| A8 | 58.82 | 7 | 17 | 3 |
| A9 | 33.33 | 7 | 2 | 5 |
| A10 | 41.67 | 7 | 8 | 2 |
>TRINITY_DN45101_c1_g2_i1 from sample A7 / Example spliced isoformCGCAACCGAATTTTCTATTTGTTAAGTTTTACAATGTTTTGGGTTTAATTTATTCCTCGTAATTTGGTGCGGGGTTTAGGCCGTTGCGTTTCCCTGGTCCTGGTCCTGCTGTCCTCCTGGTCCGTGCTTGTCCTGTCTCCCATCCCGTCGCTCGTACACGTTCATTACACTAGGTTCCTTTCTTGTGTTGATCTCATCCT
TGAAATATCGCTTCATAATGCTAGGCCCTCTCATCATAACCTCGCCCAACTTCACTGTGTCTCTAGCCATGCTTCACCGAGAATCCCGGCTCTTCAATTTTGTGCAGCACAGCAATAAGCGGAGGAGCGCTGGCTGTTAAGATCTCCACTCGACGCAGCAAAGGTTTTATGGCGACAGGATCTGTGTTTTCCATCTTGGA
AAGCTTATCTCGGGTATCTACTCTAGACTGCCAGATCCTATACTTCTCACGGATTTCAACAGCCTTTCATGTTTCGAGCCCTTGGTTTCACCCTGATTACTGAATTTTCGGTATTTGGACGGAGCATTATTGCTCAGCGCCCTACCCCTAAGTTGAATTCTACCCAACTTAAGGAAATCTTTAAATATGTTGTCGAAATG
TTCCGCCACGTGTATTCTCCAGACACTTCTAGACCCGCAGAACATATCAGGACCTCACCTCATGAGGTTATGGACATGCCTAAGAGCCATGGAAGGATGCTCGTGGATAGCTCTCGACACGTTCCCAGTAAGTCCGTTGAACTAGGGTTCCAACTCTTTTCTGATATATTAGAAGATGATAAATTTCTTGGGGAGTTGCG
GAACACCCTTAGGAAGCTTTTAGGAGCTGCGGAAACAATGGAGAAGCCTCATCTAATGCTCGCCGCCTCGATACCTAGTTTCAGGAAATACAACGGCGCAATGGGTCCATTTTCACGCCACCAGAACGACGCTCTCGGGATTTTGAATTCTTTTGGGATTCGCAACAACAGTTTATCATCTTCGTCTGTGTCTCTTGCTT
CTAGCAATCAAGGTGGGGCATTGAATCCCATGGCATCATGCTTGCCCGACAGATACTTCTTACTGGGAAATAGCAACGATTACAATAACATCACTGCCACTGCCAATTTCAGGGCCTAAGATATTTCGGCAGTCAAACAGGAAGAGGTGGAGGGGATTTTCAAGGGTCCAAAGATGGCCAACACCGAGGGTGTAGGCAGA
GGAGCCCTGGATGCTTTAGAAGCAGCAATGTGCCAGGAACCAAGGCCTTGATCCCAACAGGGCGAAGAGCGGATTTATCATGTAAGACTCCTGTATAGTGGCAATGGAGCTTCCCCTGCAAGGTTCTATAGCAGCAGCTCCCTAAGAGCCACCGGAGCTGAGTATTGCTTTTCATCCCTAATATTATATGAGTTAACAGT
CATGAAGAGGGAAGAATTAAATAAGCAAGGATCATTTTCGGATGCATCATCCTTTGTGTCAATAAGATCGATGAGCATTGTTTTTGGAAAGACTCAATGGATCAATGATGAATTTGAGACTACTGATGCAGCTCTTTTAGGCATCAACAAGAAAAATATCAACGATAAAGAAGCCCAGATTGCAATTAGCAAGCATGGAG
TGGCATGATATCTAAGTTATGATGTTAGAAACTGTGGGTACATCTTTTCCCCCAATCTCACACACAGAACTATGGGTTACCTTGAAGAAGAAGTTGTCCACTCCTATACTGAGTTCTTCAAGAAACTTGACAATGGAAACATTCCAAATGTGCCAGCCCCTGCCACAGCCATAGATTGTTGCAGGCTTCCCAAGGATTCA
ACACTCAGAGATGTGGTTATGGTAGTCAGGGATGATGAGGCTTACCATCGCCATGTCAACCACTTTGCATCACATCAAACAAATATCAAATGAATTGAACAATTTGGCCAGTTGTCTTTTCCTGTGCAACATCAAACAAATATCACATGAAGATATTTGTTGCACGCCATGGACATGGAAAATATATTAACCTGTATGGT
CTTTTGAATTCTGTCAAAAGTCATCAACAAAAACATAAATCAGATTAACTTGGACTCTTTTGCCAAAGGGTACTGCAAATTTTGTGGATGACAAAGATTTCAGAAGCGAGAATGAAGAATCCAGTTCATGATCACAAGATGGGGCCATTTTAAAAAATATAAGTATTGTCTATTTTTCATAAATAGAGTTGCTAGTTGTT
CAAATTTTGATATTTGCAAAAGAGTGATTGTCACATGTCAATCCCATATTCCAAATCTAAATCCTCGTGTTTCTATGTTAATTACAATATCTCTTGGAAGACGGATGGGATTATTTGGATACAGAGAATATCAAAGTGTTTGTCTGAGTCAAGTATCATGATTCAAACACTGCTTGCTTTGAAATATGATGTGGATTTAT
CTATCAGCATGTCTATGCATCTTTTGAAGTCGCT
>TRINITY_DN45101_c1_g2_i5 from sample A7 / Example unspliced isoform:CGCAACCGAATTTTCTATTTGTTAAGTTTTACAATGTTTTGGGTTTAATTTATTCCTCGTAATTTGGTGCGGGGTTTAGGCCGTTGCGTTTCCCTGGTCCTGGTCCTGCTGTCCTCCTGGTCCGTGCTTGTCCTGTCTCCCATCCCGTCGCTCGTACACGTTCATTACACTAGGTTCCTTTCTTGTGTTGATCTCATCCT
TGAAATATCGCTTCATAATGCTAGGCCCTCTCATCATAACCTCGCCCAACTTCACTGTGTCTCTAGCCATGCTTCACCGAGAATCCCGGCTCTTCAATTTTGTGCAGCACAGCAATAAGCGGAGGAGCGCTGGCTGTTAAGATCTCCACTCGACGCAGCAAAGGTTTTATGGCGACAGGATCTGTGTTTTCCATCTTGGA
AAGCTTATCTCGGGTATCTACTCTAGACTGCCAGATCCTATACTTCTCACGGATTTCAACAGCCTTTCATGTTTCGAGCCCTTGGTTTCACCCTGATTACTGAATTTTCGGTATTTGGACGGAGCATTATTGCTCAGCGCCCTACCCCTAAGTTGAATTCTACCCAACTTAAGGAAATCTTTAAATATGTTGTCGAAATG
TTCCGCCACGTGTATTCTCCAGACACTTCTAGACCCGCAGAACATATCAGGACCTCACCTCATGAGGTTATGGACATGCCTAAGAGCCATGGAAGGATGCTCGTGGATAGCTCTCGACACGTTCCCAGTAAGTCCGTTGAACTAGGGTTCCAACTCTTTTCTGATATATTAGAAGATGATAAATTTCTTGGGGAGTTGCG
GAACACCCTTAGGAAGCTTTTAGGAGCTGCGGAAACAATGGAGAAGCCTCATCTAATGCTCGCCGCCTCGATACCTAGTTTCAGGAAATACAACGGCGCAATGGGTCCATTTTCACGCCACCAGAACGACGCTCTCGGGATTTTGAATTCTTTTGGGATTCGCAACAACAGTTTATCATCTTCGTCTGTGTCTCTTGCTT
CTAGCAATCAAGGTGGGGCATTGAATCCCATGGCATCATGCTTGCCCGACAGATACTTCTTACTGGGAAATAGCAACGATTACAATAACATCACTGCCACTGCCAATTTCAGGGCCTAAGATATTTCGGCAGTCAAACAGGAAGAGGTGGAGGGGATTTTCAAGGGTCCAAAGATGGCCAACACCGAGGGTGTAGGCAGA
GGAGCCCTGGATGCTTTAGAAGCAGCAATGTGCCAGGAACCAAGGCCTTGATCCCAACAGGGCGAAGAGCGGATTTATCATGTAAGACTCCTGTATAGTGGCAATGGAGCTTCCCCTGCAAGGTTCTATAGCAGCAGCTCCCTAAGAGCCACCGGAGCTGAGTATTGCTTTTCATCCCTAATATTATATGAGTTAACAGT
CATGAAGAGGGAAGAATTAAATAAGCAAGGATCATTTTCGGATGCATCATCCTTTGTGTCAATAAGATCGATGAGCATTGTTTTTGGAAAGACTCAATGGATCAATGATGAATTTGAGACTACTGATGCAGCTCTTTTAGGCATCAACAAGAAAAATATCAACGATAAAGAAGCCCAGATTGCAATTAGCAAGCATGGAG
TGGCATGATATCTAAGTTATGATGTTAGAAACTGTGGGTACATCTTTTCCCCCAATCTCACACACAGAACTATGGGTTACCTTGAAGAAGAAGTTGTCCACTCCTATACTGAGTTCTTCAAGAAACTTGACAATGGAAACATTCCAAATGTGCCAGCCCCTGCCACAGCCATAGATTGTTGCAGGCTTCCCAAGGATTCA
ACACTCAGAGATGTGGTTATGGTAGTCAGGGATGATGAGGCTTACCATCGCCATGTCAACCACTTTGCATCAgtcagtagtttttcccatcattatgtttctttcattcagggttcagggcttaaggcttggggctaatcacactatcagtcattctgtttgtatgtctcacttagattgagggattgtaatgaggtttt
ttttgtatggatgggttttttcgttatgctttcatttagattgtttcattgaatttttcatttgggtgcccaatcaagatatccatttccatggaagagagctaagggaatctgcatctccacttgattcttgttaagctaatgcctcaagtgctctgcatcatagtttcttgttaaacctggagctacttttaatatgt
gtttctacatgttcttgtctgtcttttcctgtgcagCATCAAACAAATATCAAATGAATTGAACAATTTGGCCAGTTGTCTTTTCCTGTGCAACATCAAACAAATATCACATGAAGATATTTGTTGCACGCCATGGACATGGAAAATATATTAACCTGTATGGTCTTTTGAATTCTGTCAAAAGTCATCAACAAAAACAT
AAATCAGATTAACTTGGACTCTTTTGCCAAAGGGTACTGCAAATTTTGTGGATGACAAAGATTTCAGAAGCGAGAATGAAGAATCCAGTTCATGATCACAAGATGGGGCCATTTTAAAAAATATAAGTATTGTCTATTTTTCATAAATAGAGTTGCTAGTTGTTCAAATTTTGATATTTGCAAAAGAGTGATTGTCACAT
GTCAATCCCATATTCCAAATCTAAATCCTCGTGTTTCTATGTTAATTACAATATCTCTTGGAAGACGGATGGGATTATTTGGATACAGAGAATATCAAAGTGTTTGTCTGAGTCAAGTATCATGATTCAAACACTGCTTGCTTTGAAATATGATGTGGATTTATCTATCAGCATGTCTATGCATCTTTTGAAGTCGCT