sp|Q9M3G7|ATM_ARATH ----> Serine/threonine-protein kinase ATM

Intron 1 GTGATTACAA ... ATGGGGAAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	88.24	1	8	7
A2	64.29	5	10	8
A3	57.89	4	2	9
A4	88.89	1	4	12
A5	52	6	7	6
A6	100	0	6	3
A7	76.92	3	9	11
A8	77.78	2	4	10
A9	64.71	6	10	12
A10	81.82	2	11	7

>TRINITY_DN108981_c0_g1_i4 from sample A5 / Example spliced isoform

GAGTAATGGTACATGGAAATTCCCTGGGATTGGAGCTTTTCAATGCTATGACAAGGTGTGGATGGTAGTGGGAACAATAACACTTCCAACCTTATGGATCCTACGTTGAGTTTATAGATCCTTTAATAATCATTCTGTTATGTATCTGTCCTTGCAGTATATGCTGGTTAACCTTAAAGCCACTGCTGAAACTGCTGGTA
AGAAAGAATGGGGTTATGGAGGACCAACTGATGCAGGATTCTAGCAGAAGCTGAATCGATTTTTCAGAATTCCGGTGCCAGACTCTCTGGTAAAGTGGCAGGTATTCATTGGCATTATTTAACCAGATCTCATGCACCTGAGCTTACTGCAGGGTATTACAATACTAGAGACAGAAATGGTTATCTTCCCATAGCACAAA
TGTTTGGGAGA

>TRINITY_DN108981_c0_g1_i5 from sample A5 / Example unspliced isoform:

GAGTAATGGTACATGGAAATTCCCTGGGATTGGAGCTTTTCAATGCTATGACAAGTATATGCTGGTTAACCTTAAAGCCACTGCTGAAACTGCTGGTAAGAAAGAATGGGGTTATGGAGGACCAACTGATGCAGgtgattacaacaattggccggaggagaccgacttcttctgccgtgaaggtggttggaactcacctt
atggtgatttttttttgcagtggtattctaacatgcttcttaatcatggggaaagGATTCTAGCAGAAGCTGAATCGATTTTTCAGAATTCCGGTGCCAGACTCTCTGGTAAAGTGGCAGGTATTCATTGGCATTATTTAACCAGATCTCATGCACCTGAGCTTACTGCAGGGTATTACAATACTAGAGACAGAAATGGT
TATCTTCCCATAGCACAAATGTTTGGGAGA