NA ----> NA

Intron 1 GTTAAGTTTG ... AATCTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	51.35	72	3	76
A2	52.34	51	9	56
A3	55.04	58	5	71
A4	52.75	43	2	48
A5	54.84	28	6	34
A6	53.21	51	2	58
A7	53.33	189	26	216
A8	51.01	218	9	227
A9	53.06	184	5	208
A10	50.39	193	6	196

>TRINITY_DN42411_c5_g1_i1 from sample A8 / Example spliced isoform

GTAGAACCAACAGCAGCATCTACTCAATCTGAAGGCGATCAGGTTGACATAATGGCAGTCTACAGGTTTTGAAGGATGGACTCCAAGCTGTGCATGTTCCTTATGCATGTTCAAATAAGATCATTCCTTAATGCTTGGGTGTTGAAACTTGTGTCATATGACTTGCACATTTCTTGTTGCCGTATAAGAAATTTTATTAA
TCAGCTGAAGCAACTGGAAAAAGAAAATGTTAGACCGCGTATCACAGATGTGGGTGGGCATCCAAATAACAAGAGAAATAGAACAGGCTCAAATGACTCAGATTTGGGTGGGCAGCCCAACAACAAGAGAAATAGAACGGACTCAAATGGTTCATCTGAAAAAATTGGAGATCGAGCCACAAGGTGTACCTTTATAAATC
ATTCCAGGTTTCCTAAAGATCAGCAGCCTGACGTTAGTCTCTTGGAGAATACTTGCCAGGCTCCTTCAGTAAAGGCATGGGTGAATGGCATTAAGACAAACAATGCATCTTGTGAGAATGGTTGCAGAACTGATGCTAATGTGCAAGAGAACAAACATCTTCAGAAGGCAAAGTTACCTGTCAAAGATAGGATCCGTCTC
CTTGTGGGTTATGATGATTTAATTAGTGATGGTATACAAGATCATGATTTCAAGGAAGAGAATGGTGGGCATATCCAGGATGCTATATGAGGAGCAGGATTGATAGTCATATGCAATCTTACTATTTTCTGGGCTCATACATTCTCAAGCTGTGCAAATACTCTGTTAGGGTTAGGAATAAGTAGCCTTTGATGAGATCT
ACTTTTTTCTGGCAGCATATGAGAAATGATATGGAGTTACTAAAAAAATCGTTGTATTCTTTCAGAACTGTACAGTGGCCATCATATTTTTCTTTGTCAAATGAAATAGATTTCGATCGATCCTATTCTCTTCTGGTTTGGGG

>TRINITY_DN42411_c5_g1_i10 from sample A8 / Example unspliced isoform:

GTAGAACCAACAGCAGCATCTACTCAATCTGAAGGCGATCAGGTTGACATAATGGTAGTCTACAGGTTTGTTTAGACTGATAAAGAAAGCTTTTGGTTATATCCCTTCATTAGATATGTGTTGTGATCTTATTGTTTCATTATAATTGGGTTCATCACAATGAAAGCCTTTGTGTTTAGGTGTTTCAAAAGTTCGTGAAA
TTATTTCTATATAATTTTAGGAAATTTTCTACTTCATGAGCTGGTTATCCTTGAATATTTCTCTGAAGTATGTTTGTTTCACAGGTTTTGAAGGATGGACTCCAAGCTGTGCATGTTCCTTATGCATGTTCAAATAAGATCATTCCTTAATGCTTGGGTGTTGAAACTTGTGTCATATGACTTGCACATTTCTTGTTGCC
GTATAAGAAATTTTATTAATCAGCTGgttaagtttgtaagctgatttttttttcttcagtttttaatagttatggaaatatttctatgttcttgaatggataattgtttaatcttgcagAAGCAACTGGAAAAAGAAAATGTTAGACCGCGTATCACAGATGTGGGTGGGCATCCAAATAACAAGAGAAATAGAACAGGC
TCAAATGACTCAGATTTGGGTGGGCAGCCCAACAACAAGAGAAATAGAACGGACTCAAATGGTTCATCTGAAAAAATTGGAGATCGAGCCACAAGGTGTACCTTTATAAATCATTCCAGGTTTCCTAAAGATCAGCAGCCTGACGTTAGTCTCTTGGAGAATACTTGCCAGGCTCCTTCAGTAAAGGCATGGGTGAATGG
CATTAAGACAAACAATGCATCTTGTGAGAATGGTTGCAGAACTGATGCTAATGTGCAAGAGAACAAACATCTTCAGAAGGCAAAGTTACCTGTCAAAGATAGGATCCGTCTCCTTGTGGGTTATGATGATTTAATTAGTGATGGTATACAAGATCATGATTTCAAGGAAGAGAATGGTGGGCATATCCAGGATGCTATAT
GAGGAGCAGGATTGATAGTCATATGCAATCTTACTATTTTCTGGGCTCATACATTCTCAAGCTGTGCAAATACTCTGTTAGGGTTAGGAATAAGTAGCCTTTGATGAGATCTACTTTTTTCTGGCAGCATATGAGAAATGATATGGAGTTACTAAAAAAATCGTTGTATTCTTTCAGAACTGTACAGTGGCCATCATATT
TTTCTTTGTCAAATGAAATAGATTTCGATCGATCCTATTCTCTTCTGGTTTGGGG