sp|O23264|SEBP1_ARATH ----> Selenium-binding protein 1
Intron 1 GTATGCTTTT ... GACATTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 2 | 2 | 0 |
| A2 | -1 | 0 | 0 | 0 |
| A3 | 0 | 2 | 0 | 0 |
| A4 | 14.29 | 9 | 3 | 0 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 33.33 | 3 | 3 | 0 |
| A7 | 16.13 | 13 | 4 | 1 |
| A8 | 18.75 | 13 | 4 | 2 |
| A9 | 66.67 | 2 | 2 | 6 |
| A10 | 5.55 | 8 | 0 | 1 |
>TRINITY_DN42646_c3_g2_i2 from sample A8 / Example spliced isoformTGCACGTCGACAAAATTGTAGGCTAGGCTGTGTGTATGAAGCTAGTGTTCGATTCATTACTACTCGGCGTAGAACTACTAGTGATGATTCTTTCTCTTTATCTGTGGTTTTGTTCGACAATACATCGATTCTTGCACTAGAAATGCAAAAGATGAAGGAAGATATAGTGGATAGGCTTCTTCAATATGTTGCAAAGGGGG
AACCAGGCAGAATACTAGTTAAGATTGATACCCAGCCCTATTTAATGCTCCATTTTCAAATTGTTTTACCTCTCTTATTTTACCTGGAACCGCTCTACTTATAAATTGTCAAGATTCATCCTCTTATTCAATATTGTTGTTTTTTCTCTCGCCTCGTTTCTTATATGCGCGAAACCTCCAAACTACGTTTCTCGTTCCGT
TTCCCGTTTCTCGTAACATAGATTGCAGTCACTTCAGAGCAAGAAACTTGATTGAATTACCAAGTTAACATGGTTTGAATCCTTTTTACTATGAATTTGGTGTAGGAACTGGTAGGGTAAAGCCCGACTACCTGGCTACCATAGATGTGAACCCAAAGTCGCCCTCTTATTCAAAGGTAGTGCATCGGTTGCCTGTAACT
CATTTAGGTGATGAGTTGCACCACACTGGTTGGAATGCATGTAGCTCTTGCCATGGTGATCCTTCTGCTCAAAGGCGCTACCTCATCTTACCTTCATTGCTGTCATCCCGTGTTTATGTTGTTGATACGGGTAAAAATGAAAGAGCACCTGTCCTTCACAAAGTCATTGAGCCAGATGTTATCTTGTCCAAGACGAATTT
GGCATTTCCTCATACTGCTCATTGCCTTGCATCTGGTGAGATTTTAATCTCATGCATGGGTGATAAAGATGGAAATGCACAAGGTGCTGGTTTCTTGGTTTTGGATTCAGATTTCAACGTGAAAGGGAGGTGGGAGAAGCCTGGTCAAAGTCCTGACTTTGGTTATGATTTCTGGTACCAACCACGACATGGTACAATGA
TCAGTTCATCATGGGGAGCACCTGCAGCTTTTTCAAAAGGTTTCAATCCTCAACATGTTGCAGATGGCCTATATGGGAGACATTTGTTTGTTTATAGTTGGCCTGAAGGTTCATTAAAGCAAACATTGGACTTGGGAAGCACTGGACTTATACCATTGGAGGTAAGGTTTCTTCATGATCCTGCCAAAGACACGGGCTAT
GTAGCATGTGCTTTAAGTAGTACCTTGGTGCGTTTTTTCAAGTTACCAGATGGAACATGGAACCATGAGGTTGCAGTATCAGTGCCATCTTTGAAGGTTCAAAACTGGATTCTGCCAGAAATGCCTGGACTAATAACTGATCTCGTAATTTCCTTGGATGATCGTTACCTTTATTTTGTAAATTGGCTGCACGGAGATAT
TCGACAGTACAGCATTAAAGATCCTGCAAAGCCTGTCTTGACTGGGCAAGTTTGGGTAGGAGGTCTGGTACGAAAGGGAAGCCAAGTAACAGTCGTTAAGGAGGATGGACAAACATGGCAATCTGACGTTTCTGATGTTCAAGGTAAACGGTTGAGGGCAGGACCACAAATGATCCAATTAAGTTTGGATGGAAAGCGCC
TTTATGTCACCAATTCGTTATTTAGTCCTTGAGATCAACAGTTCTACCCTGAACTGATAGAGAAAGGCTCCCATATGCTTCAGATTGATTGCGACACTGAGAAAGGTGGAGTGGCAATAAATCCCAATTTCATGGTTGACTTCGGAGATGAACCAGAAGGCCCAGCACTGGCTCATGAGATGAGGTATCCTGGTGGGGAT
TGCACATCAGACATATGGCTCTAGAAATTGAAATCCAGTCGATAAAAGCATGATCAATGCCTACTCTTTAAGTCTATCTACATATTCTTATCTTTTATCATTTGATTAGTAAATCAGGTTGTATTCTCTTTGTAGAAGAGCAATTGTTTTTTTCTCTACTCAATGAGAAAATGAAGACAGTGCTCTTCAATCTGTTAGTA
CAACTTGCTAAGCAACGTTTGTTTTTGAAATTATGTGGCG
>TRINITY_DN42646_c3_g2_i1 from sample A8 / Example unspliced isoform:TGCACGTCGACAAAATTGTAGGCTAGGCTGTGTGTATGAAGCTAGTGTTCGATTCATTACTACTCGGCGTAGAACTACTAGTGATGATTCTTTCTCTTTATCTGTGGTTTTGTTCGACAATACATCGATTCTTGCACTAGAAATGCAAAAGATGAAGGAAGATATAGTGGATAGGCTTCTTCAATATGTTGCAAAGGGGG
AACCAGGCAGAATACTAGTTAAGATTGATACCCAGCCCTATTTAATGCTCCATTTTCAAATTGTTTTACCTCTCTTATTTTACCTGGAACCGCTCTACTTATAAATTGTCAAGATTCATCCTCTTATTCAATATTGTTGTTTTTTCTCTCGCCTCGTTTCTTATATGCGCGAAACCTCCAAACTACGTTTCTCGTTCCGT
TTCCCGTTTCTCGTAACATAGATTGCAGTCACTTCAGAGCAAGAAACTTGATTGAATTACCAAGTTAACATGGTTTGAATCCTTTTTACTATGAATTTGGTGTAGGAACTGGTAGGGTAAAGCCCGACTACCTGGCTACCATAGATGTGAACCCAAAGTCGCCCTCTTATTCAAAGGTAGTGCATCGGTTGCCTGTAACT
CATTTAGGTGATGAGTTGCACCACACTGGTTGGAATGCATGTAGCTCTTGCCATGGTGATCCTTCTGCTCAAAGGCGCTACCTCATCTTACCTTCATTGCTGTCATCCCGTGTTTATGTTGTTGATACGGGTAAAAATGAAAGAGCACCTGTCCTTCACAAAGTCATTGAGCCAGATGTTATCTTGTCCAAGACGAATTT
GGCATTTCCTCATACTGCTCATTGCCTTGCATCTGGTGAGATTTTAATCTCATGCATGGGTGATAAAGATGGAAATGCACAAGGTGCTGGTTTCTTGGTTTTGGATTCAGATTTCAACGTGAAAGGGAGGTGGGAGAAGCCTGGTCAAAGTCCTGACTTTGGTTATGATTTCTGGTACCAACCACGACATGGTACAATGA
TCAGTTCATCATGGGGAGCACCTGCAGCTTTTTCAAAAGGTTTCAATCCTCAACATGTTGCAGATGGCCTATATGGGAGACATTTGTTTGTTTATAGTTGGCCTGAAGGTTCATTAAAGCAAACATTGGACTTGGGAAGCACTGGACTTATACCATTGGAGgtatgcttttatatgacaacttctccccaatggaagtag
caatgctgaatgaacatgtccccaaaagttggagtcaagtagtctttgcaagataaaatccattgttacctgcaagcaacttaaggtagctttcagtgcaaatattaatcttcatgttcctgacattttagGTAAGGTTTCTTCATGATCCTGCCAAAGACACGGGCTATGTAGCATGTGCTTTAAGTAGTACCTTGGTG
CGTTTTTTCAAGTTACCAGATGGAACATGGAACCATGAGGTATGACATGGGATCTTATTTATTTCATGAATCACAGTAATTCTCCTCTCTGTCAAGAAAACAAATTATATTTGCTGTATTTGAGACTTCATTGTGAGATATTCGAGTGTTTGCATTTTCTGA
Intron 2 GTTAAGATTG ... TTTGGTGTAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 71.43 | 1 | 3 | 2 |
| A2 | 56.52 | 5 | 5 | 8 |
| A3 | 71.43 | 1 | 3 | 2 |
| A4 | 100 | 0 | 8 | 2 |
| A5 | 100 | 0 | 1 | 0 |
| A6 | 100 | 0 | 5 | 1 |
| A7 | 81.82 | 1 | 3 | 6 |
| A8 | 77.78 | 1 | 3 | 4 |
| A9 | 63.64 | 2 | 5 | 2 |
| A10 | 54.55 | 5 | 3 | 9 |
>TRINITY_DN35281_c0_g1_i3 from sample A7 / Example spliced isoformGCTAGGCTGTGTGTATGAAGCTATTGTTCGATTCATTGCTACTCGGCGTAGAACTACTAGTGATGATTCTTTATCTGTGGTTTTGTTCGACAATACATCGATTCTTGCACTAGAAATGCAAAAGATGAAGGAAGATATAGTGGATAGGCTTCTTCAATATGTTGCAAAGGGGGAACCAGGCAGAATACTAGAACTGGTAG
GGTAAAGCCCGACTACCTGGCTACCATAGATGTGAACCCAAAGTCGCCCTCTTATTCAAAGGTAGTGCATCGGTTGCCTGTAACTCATTTAGGTGATGAGTTGCACCACACTGGTTGGAATGCATGTAGCTCTTGCCATGGTGATCCTTCTGCTCAAAGGCGCTACCTCATCTTACCTTCATTGCTGTCATCCCGTGTTT
ATGTTGTTGATACGGGTAAAAATGAAAGAGCACCTGTCCTTCACAAAGTCATTGAGCCAGATGTTATCTTGTCCAAGACGAATTTGGCATTTCCTCATACTGCTCATTGCCTTGCATCTGGTGAGATTTTAATCTCATGCATGGGTGATAAAGATGGAAATGCACAAGGTGCTGGTTTCTTGGTTTTGGATTCAGATTTC
AACGTGAAAGGGAGGTGGGAGAAGCCTGGTCAAAGTCCTGACTTTGGTTATGATTTCTGGTACCAACCACGACATGGTACAATGATCAGTTCATCATGGGGAGCACCTGCAGCTTTTTCAAAAGGTTTCAATCCTCAACATGTTGCAGATGGCCTATATGGGAGACATTTGTTTGTTTATAGTTGGCCTGAAGGTTCATT
AAAGCAAACATTGGACTTGGGAAGCACTGGACTTATACCATTGGAGGTAAGGTTTCTTCATGATCCTGCCAAAGACACGGGCTATGTAGCATGTGCTTTAAGTAGTACCTTGGTGCGTTTTTTCAAGTTACCAGATGGAACATGGAACCATGAGGTTGCAGTATCAGTGCCATCTTTGAAGGTTCAAAACTGGATTCTGC
CAGAAATGCCTGGACTAATAACTGATCTCGTAATTTCCTTGGATGATCGTTACCTTTATTTTGTAAATTGGCTGCACGGAGATATTCGACAGTACAGCATTAAAGATCCTGCAAAGCCTGTCTTGACTGGGCAAGTTTGGGTAGGAGGTCTGGTACGAAAGGGAAGCCAAGTAACAGTCGTTAAGGAGGATGGACAAACA
TGGCAATCTGACGTTTCTGATGTTCAAGGTAAACGGTTGAGGGCAGGACCACAAATGATCCAATTAAGTTTGGATGGAAAGCGCCTTTATGTCACCAATTCGTTATTTAGTCCTTGAGATCAACAGTTCTACCCTGAACTGATAGAGAAAGGCTCCCATATGCTTCAGATTGATTGCGACACTGAGAAAGGTGGAGTGGC
AATAAATCCCAATTTCATGGTTGACTTCGGAGATGAACCAGAAGGCCCAGCACTGGCTCATGAGATGAGGTATCCTGGTGGGGATTGCACATCAGACATATGGCTCTAGAAATTGAAATCCAGTCGATAAAAGCATGATCAATGCCTACTCTTTAAGTCTATCTACATATTCTTATCTTTTATCATTTGATTAGTAAATC
AGGTTGTATTCTCTTTGTAGAAGAGCAATTGTTTTTTTCTCTACTCAATGAGAAAATGAAGACAGTGCTCTTCAATCTGTTAGTACAACTTGCTAAGCAACGTTTGTTTTTGAAATTATGTGGCG
>TRINITY_DN35281_c0_g1_i2 from sample A7 / Example unspliced isoform:GCTAGGCTGTGTGTATGAAGCTATTGTTCGATTCATTGCTACTCGGCGTAGAACTACTAGTGATGATTCTTTATCTGTGGTTTTGTTCGACAATACATCGATTCTTGCACTAGAAATGCAAAAGATGAAGGAAGATATAGTGGATAGGCTTCTTCAATATGTTGCAAAGGGGGAACCAGGCAGAATACTAgttaagattg
atacccagccctatttaatgctccattttcaaattgttttacctctcttattttacctggaaccgctctacttataaattgtcaagattcatcctcttattcaatattgttgttttttctctcgcctcgtttcttatatgcgcgaaacctccaaactacgtttctcgttccgtttcccgtttctcgtaacatagattgca
gtcacttcagagcaagaaacttgattgaattaccaagttaacatggtttgaatcctttttactatgaatttggtgtagGAACTGGTAGGGTAAAGCCCGACTACCTGGCTACCATAGATGTGAACCCAAAGTCGCCCTCTTATTCAAAGGTAGTGCATCGGTTGCCTGTAACTCATTTAGGTGATGAGTTGCACCACACT
GGTTGGAATGCATGTAGCTCTTGCCATGGTGATCCTTCTGCTCAAAGGCGCTACCTCATCTTACCTTCATTGCTGTCATCCCGTGTTTATGTTGTTGATACGGGTAAAAATGAAAGAGCACCTGTCCTTCACAAAGTCATTGAGCCAGATGTTATCTTGTCCAAGACGAATTTGGCATTTCCTCATACTGCTCATTGCCT
TGCATCTGGTGAGATTTTAATCTCATGCATGGGTGATAAAGATGGAAATGCACAAGGTGCTGGTTTCTTGGTTTTGGATTCAGATTTCAACGTGAAAGGGAGGTGGGAGAAGCCTGGTCAAAGTCCTGACTTTGGTTATGATTTCTGGTACCAACCACGACATGGTACAATGATCAGTTCATCATGGGGAGCACCTGCAG
CTTTTTCAAAAGGTTTCAATCCTCAACATGTTGCAGATGGCCTATATGGGAGACATTTGTTTGTTTATAGTTGGCCTGAAGGTTCATTAAAGCAAACATTGGACTTGGGAAGCACTGGACTTATACCATTGGAGGTAAGGTTTCTTCATGATCCTGCCAAAGACACGGGCTATGTAGCATGTGCTTTAAGTAGTACCTTG
GTGCGTTTTTTCAAGTTACCAGATGGAACATGGAACCATGAGGTTGCAGTATCAGTGCCATCTTTGAAGGTTCAAAACTGGATTCTGCCAGAAATGCCTGGACTAATAACTGATCTCGTAATTTCCTTGGATGATCGTTACCTTTATTTTGTAAATTGGCTGCACGGAGATATTCGACAGTACAGCATTAAAGATCCTGC
AAAGCCTGTCTTGACTGGGCAAGTTTGGGTAGGAGGTCTGGTACGAAAGGGAAGCCAAGTAACAGTCGTTAAGGAGGATGGACAAACATGGCAATCTGACGTTTCTGATGTTCAAGGTAAACGGTTGAGGGCAGGACCACAAATGATCCAATTAAGTTTGGATGGAAAGCGCCTTTATGTCACCAATTCGTTATTTAGTC
CTTGAGATCAACAGTTCTACCCTGAACTGATAGAGAAAGGCTCCCATATGCTTCAGATTGATTGCGACACTGAGAAAGGTGGAGTGGCAATAAATCCCAATTTCATGGTTGACTTCGGAGATGAACCAGAAGGCCCAGCACTGGCTCATGAGATGAGGTATCCTGGTGGGGATTGCACATCAGACATATGGCTCTAGAAA
TTGAAATCCAGTCGATAAAAGCATGATCAATGCCTACTCTTTAAGTCTATCTACATATTCTTATCTTTTATCATTTGATTAGTAAATCAGGTTGTATTCTCTTTGTAGAAGAGCAATTGTTTTTTTCTCTACTCAATGAGAAAATGAAGACAGTGCTCTTCAATCTGTTAGTACAACTTGCTAAGCAACGTTTGTTTTTG
AAATTATGTGGCG