sp|F4JNX2|SDEH4_ARATH ----> Senescence/dehydration-associated protein At4g35985, chloroplastic

Intron 1 GTTAGTTGCT ... ATGACTGTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	80.62	25	116	92
A2	65.16	27	66	35
A3	67.84	32	85	50
A4	62.26	30	65	34
A5	71.43	13	39	26
A6	65.69	111	235	190
A7	69.64	75	180	164
A8	69.57	68	167	144
A9	69.71	88	219	186
A10	71.18	84	235	180

>TRINITY_DN47359_c0_g5_i1 from sample A7 / Example spliced isoform

AAAGTCTAAATAATTGTATCTCTTTGATAAAGAAGAAGCAGAAGCATATATATCATTTCGATTCCATTCAAAGGCGATTTGGGTAAATCAAATTCTGAATTCTGTTTAGCATAGCAAAAGAAGTAAGTACAATGGGGTTGTTGGATAAGCTCTGGAACGATACTCTGGCCGGTCCTCGCCTTGAGAGTGGCCGAGTTTGG
AAGACTGGTAATACTAATTCTGCCATGACAACCCACTTCAGTCCAGGCACCGTGCTTCTCTCAATGGAATTGGGGTGCTAATATTCAATATACCCTATAATTCAGAGGGTTGGGTTAATACGCATATTCAATATAACCGGTAAGTTATGGATCTTGAACACTGG

>TRINITY_DN47359_c0_g5_i2 from sample A7 / Example unspliced isoform:

AAAGTCTAAATAATTGTATCTCTTTGATAAAGAAGAAGCAGAAGCATATATATCATTTCGATTCCATTCAAAGGCGATTTGGGTAAATCAAATTCTGAATTCTGTTTAGCATAGCAAAAGAAGTAAGTACAATGGGGTTGTTGGATAAGCTCTGGAACGATACTCTGGCCGGTCCTCGCCTTGAGAGTGGCCGAGTTTGG
AAGACTGGTAATACTAATTCTGCCATGACAACCCACTTCAGTCCAGgttagttgctttgtatgaattgttagatgttgtttgtacttgatccccatattagcccatatggatttacacctatatagggttcatgcctatatatatgactgtagGCACCGTGCTTCTCTCAATGGAATTGGGGTGCTAATATTCAATATAC
CCTATAATTCAGAGGGTTGGGTTAATACGCATATTCAATATAACCGGTAAGTTATGGATCTTGAACACTGG