sp|Q9LUT2|METK4_ARATH ----> S-adenosylmethionine synthase 4
Intron 1 GTTGTTTGCT ... TCTTTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.29 | 120 | 0 | 20 |
| A2 | 16.87 | 138 | 0 | 28 |
| A3 | 18.24 | 121 | 0 | 27 |
| A4 | 17.39 | 133 | 0 | 28 |
| A5 | 12.77 | 41 | 0 | 6 |
| A6 | 0 | 6 | 0 | 0 |
| A7 | 10.53 | 34 | 0 | 4 |
| A8 | 16.67 | 10 | 0 | 2 |
| A9 | 15.56 | 38 | 0 | 7 |
| A10 | 5.36 | 53 | 0 | 3 |
>TRINITY_DN119714_c3_g2_i3 from sample A3 / Example spliced isoformTGAACTCAAAGCACTTTGACTTGTGCCCTGCTGCTCTTCCTCCTTTCTTACTCGCTCGTTCCAGGGAAACTCTGTATTGGATGCATGCCTCATAGCAAGGTTGCCTGCAAGACTTCACCACCAAGGCCTACGAACAGATTGTTCGTAAGATCTGCAGGGAGAATGGTTTCATTTTTGACGAAGTGCGTCTCGATGCTGAT
CACTGTAAAGTGCTAGTTAACATTGAACATCAGAGCCCTGACATTGCCCAGGGCTTTCATTTGGAGCCGGTGACCAGGGTGACATGTATTTAATTTTGGAGCCGGTGACCAAGAGGCTGAGGAGATTGAAGCCAGTGACCAAGGCGATTCATAAAGAACGAAAATGAGAAGTAAAAAAATTATGTTCGTAGGTTAGTACC
TACTCTCGCTTCGTTTTTATGATAATTTTATATATATATATATATATATTTTGTTTTTTTTTGTTTTTCAACTTTTAAATAAATCACATACCAATGAGAGAGCATTGCATATCGTGATCTATCTATTACCCTCATCCATTATCCCCCATCTACAAGCTCTATTCTGCACTTTGTTGTTTAAGGGTTTTGGCGTCCTCTGC
TGTGCGAACCTCTTTTTAAGAAGACCTAGAAGATCATGGCCGACAGCAAACCCGAGCTATCTCCGAATGCTCTGCATCGCATGGAGTCCTTCAAGACTAGAGATCTGCACGGGCCTGAAAACTCCATTCCCCTCTCCCCACAGTGGCTGCTTCCAAAGCCTGGGGAGAATAAATCTGTAGCAGCAACAGGGGATCCCCCT
GTTAATTGCAGTCCCATACATGGCAATCGCACTGATTTCGTAGCTAAAGTATCTGGGAATGGGGATGAGATCATTGATACAGAGAAGAGGAAAGATGTTTGGCGATCTCCCTTGGTGGAAGCTGAACGCCGTGAGAACTGGCGAGATGAAGAAAGAGATAATACTAACATTCGTCGGGACAGGTGGAGAGAAGGCGACAA
AGACCTGGGTGATCATCGCAGGTCAGACCGTTGGGCAGATAATGCTACTATGGGTAGAAGTCCAGGGGAAATACGGCGACTCCCTTCAGATCGTTGGAACGACACTGGAAACCGTGAACCTACCTATGATGCACGCCGTGAAAGTAAATGGGACACTCGATGGGGACGAGAGGACAAAGATATGGATAATCGCCGTGAAA
AATGGTTGGAATCTAGCAAGGATGGTGAAGGGCAGCGAGAGAAAGTTCCATCTGTGATAACTGACAATATTAAGGATTCTGAAAGGGAAGGTGAACATTATCCTCGTCCTTGGAGGTCAAATTCATTACAAGGCCGCGGTCGAGGTGAAGCACCCTACTTATCAGTTCCAACTCCAAACAAGCAGGCTCCGGGATTTAGC
CTTGGTAGGGGACGAGGTGATGGGGTGAGCCCAGGGTTTAGTGCTGGTCGTGGCAGAGGCATTTTTAGTGGTAGCAGTTTGATTTCTAATCCCTCAACCTATAGTTCACTTGGTGCACCTTCAGAAAGGTGGGATACTAATCTGGGTAACTCATCCTCGTTAAAGTATTATAGGGCGAAATTATTGGATATTTATCGGAA
ATGTGGCATGAAACAACACACTTTTGCAAGACTTCCGGATGGATTTTGTGAGATTCCCTTGCTTACACAAGTAGAGGCATTAGAACCATTGGCTCTTTATGTTCCCAGCCAAGAGGAAGAGGCTGTTTTAGAAGGAATTGATAAGGGAGAGATAGTTAGTAGTGGTGCACCTCAGTTTTCTAAAGATGGGGCACTTAATC
GAAACCGAGATGATACGGTTCGCAGTAGAAGGCAAAGAACTGGAAGTAGGGATGATGGGATATCCACAAATGATTCTCACAAGGAAGAGAATGCCAATGATTCTAAAGCTGATTATAGTCATCATCAAGAGACCGAGGCAGTTGAGAAGAACATAGAATTCTTGCCTGTGAATCTGAAGATCGGAGAATTTCGAGAACAG
CAGGCATTACGAGATCGTTGCATGGGCTATGAGGGTTCCGAGATTGAAGAATCTCGTTCTAAGCATAGAAATGATTCAGCTAAACTATACAAAGATGTAAGTTATAGTCGAGATTCCTCTGCTCACACTGATGGGTCTTGGAGGAAACAAGCAGTTGGAGAAGAACTCCAGGGACCACTGCATAATTGGCAGGATTTTAA
GTCTGAAATTCACCCTCCAAGATCTGATGCCAAGGATGCAATCTGGTCTACAAGGCCAGCATTGGGCAAAGATCCCAGTATTGATCATGAAAGAAATTTACTGGGAACAATCGTTTCTAGGGAAGATGGGACAGTATGGCACCACCATGAAGTTCTACAAGCTGATTCCAATCGTCTTAAACACCAATCATCAATGGAGA
GCAACAGGATGCTTGTTAGTGAAGGTACTTACATGGAACGGGAGAAGGAAGGCACTCAAGAAAGCATTCGACACATTCCACCAGAAGAATTGTCCCTATATTACAGAGATCCCCAAGGTGCTATTCAGGGTCCATTCTCAGGAGCTGATGTGATTGGTTGGTTTGAAGCTGGATATTTTGGCATAGATTTGCCAGTTCGT
CTAGTCAATGCCTCGGTAAACTCTCCTTTCTTTTCACTAGGAGATGTCATGCCACACTTGCGGATGAAGTCAAGAGCTCCTCCAGGGTTTGGTACCCCAAAACAAGGGGACGTGGCAGATTCAACCATTAGAAATAAATTTGGCAGCCATGGAAATGTGCAAGCAAACATTATTGGCAGTGGCTGTGATCTTTCTATGAA
TGACCAAAAAGATACAAGGGAGATAGCAGGAGCTGAGAAAAAGTTTATGGAATCTCTTATTAGTGGAACTTTCAACAGTCCTCATCCTGTGGAATCTTTTAACCTTAAAGAAGGAGGGCCACGTGGATTTCAAGGGCTTAGTCCTGGGGGGTCTTCATCACTTGGGACAGATGGTGTGTTGGACATGAATTATGCAGTGG
GACGGGCAGTGTCACCATACCCTTCCATGGAAAGACAAAAATCTCTTCCAAACGTTTTTCCCTATCGATGGTCAGCAAGAGATGCACCACCTCTGGTAACTAACTCAGAGACTGTTGCTGATAGTGTGAGGTCATTACCGCAACTGTCTAACATGACAGCAGATGCTTCATCTACCATCTCTCATGGCAGTCAACACGCA
GACCTTATGTCTATTCTGAAAGGTGCAGCAGACCTCAGTGGTGTTTCACAAATAAATAACGCTGTTAAACAATGGGCAAATTATGGTGATGTGCAGTCTCGTGGTAGTCTTGGTCATGGCAGTGTGGATATTTCTCATCAAGATCTGCTAGATGTGCATCATCTACAGCGGTTTGCTCCTATTCAAACAGGATTTCAATT
CCAACCCCAGAGGCAACAGCAGCAACACCAGCCACTTATGCAACGTGTAATGTCACTGCCCTCTGAAAATCTCTCTGGTGGAATGCCATTGGAACAGCTTTTGCCCTCTGGCCTCTCACAGGATCCTGTGACTTTAAATTTAATTCAAAAGCAGCAGCAGCAGCAGCAGCAGCAACAACATCAACTACTACTTTCTCAGC
TTCAGTCACGTTCTCAGGCTTCATTGCCATCTCATG
>TRINITY_DN119714_c3_g2_i1 from sample A3 / Example unspliced isoform:GAATCTTTTAACCTTAAAGAAGgttgtttgctttgatatataaagtagcaaaaaatttagattgttgtgaaatcttcaaatgattatatgccagaggaagtgttataatgacattatatgccagaggaagtgttataatttattagttttagttttagttttgttatgttttcatagtttcctggcatgccgatagaaag
tgttgcatataacttgtgaaaaaagttttgccagcgtgaatctttatgtcaattcttttgacccccatttttcttttacagGAGGGCCACGTGGATTTCAAGGGCTTAGTCCTGGGGGGTCTTCATCACTTGGGACAGATGGTGTGTTGGACATGAATTATGCAGTGGGACGGGCAGTGTCACCATACCCTTCCATGGAA
AGACAAAAATCTCTTCCAAACGTTTTTCCCTATCGATGGTCAGCAAGAGATGCACCACCTCTGGTAACTAACTCAGAGACTGTTGCTGATAGTGTGAGGTCATTACCGCAACTGTCTAACATGACAGCAGATGCTTCATCTACCATCTCTCATGGCAGTCAACACGCAGACCTTATGTCTATTCTGAAAGGTGCAGCAGA
CCTCAGTGGTGTTTCACAAATAAATAACGCTGTTAAACAATGGGCAAATTATGGTGATGTGCAGTCTCGTGGTAGTCTTGGTCATGGCAGTGTGGATATTTCTCATCAAGATCTGCTAGATGTGCATCATCTACAGCGGTTTGCTCCTATTCAAACAGGATTTCAATTCCAACCCCAGAGGCAACAGCAGCAACACCAGC
CACTTATGCAACGTGTAATGTCACTGCCCTCTGAAAATCTCTCTGGTGGAATGCCATTGGAACAGCTTTTGCCCTCTGGCCTCTCACAGGATCCTGTGACTTTAAATTTAATTCAAAAGCAGCAGCAGCAGCAGCAGCAGCAACAACATCAACTACTACTTTCTCAGCTTCAGTCACGTTCTCAGGCTTCATTGCCATCT
CATG
Intron 2 GTAAAGGAAT ... TTTTCATTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25.24 | 234 | 79 | 3 |
| A2 | 24.37 | 149 | 48 | 0 |
| A3 | 26.26 | 278 | 99 | 4 |
| A4 | 21.36 | 173 | 47 | 1 |
| A5 | 24.78 | 85 | 28 | 3 |
| A6 | 27.27 | 16 | 6 | 0 |
| A7 | 22.39 | 52 | 15 | 0 |
| A8 | 44.44 | 10 | 8 | 2 |
| A9 | 23.38 | 59 | 18 | 0 |
| A10 | 33.71 | 59 | 30 | 1 |
>TRINITY_DN119714_c3_g2_i3 from sample A3 / Example spliced isoformTGAACTCAAAGCACTTTGACTTGTGCCCTGCTGCTCTTCCTCCTTTCTTACTCGCTCGTTCCAGGGAAACTCTGTATTGGATGCATGCCTCATAGCAAGGTTGCCTGCAAGACTTCACCACCAAGGCCTACGAACAGATTGTTCGTAAGATCTGCAGGGAGAATGGTTTCATTTTTGACGAAGTGCGTCTCGATGCTGAT
CACTGTAAAGTGCTAGTTAACATTGAACATCAGAGCCCTGACATTGCCCAGGGCTTTCATTTGGAGCCGGTGACCAGGGTGACATGTATTTAATTTTGGAGCCGGTGACCAAGAGGCTGAGGAGATTGAAGCCAGTGACCAAGGCGATTCATAAAGAACGAAAATGAGAAGTAAAAAAATTATGTTCGTAGGTTAGTACC
TACTCTCGCTTCGTTTTTATGATAATTTTATATATATATATATATATATTTTGTTTTTTTTTGTTTTTCAACTTTTAAATAAATCACATACCAATGAGAGAGCATTGCATATCGTGATCTATCTATTACCCTCATCCATTATCCCCCATCTACAAGCTCTATTCTGCACTTTGTTGTTTAAGGGTTTTGGCGTCCTCTGC
TGTGCGAACCTCTTTTTAAGAAGACCTAGAAGATCATGGCCGACAGCAAACCCGAGCTATCTCCGAATGCTCTGCATCGCATGGAGTCCTTCAAGACTAGAGATCTGCACGGGCCTGAAAACTCCATTCCCCTCTCCCCACAGTGGCTGCTTCCAAAGCCTGGGGAGAATAAATCTGTAGCAGCAACAGGGGATCCCCCT
GTTAATTGCAGTCCCATACATGGCAATCGCACTGATTTCGTAGCTAAAGTATCTGGGAATGGGGATGAGATCATTGATACAGAGAAGAGGAAAGATGTTTGGCGATCTCCCTTGGTGGAAGCTGAACGCCGTGAGAACTGGCGAGATGAAGAAAGAGATAATACTAACATTCGTCGGGACAGGTGGAGAGAAGGCGACAA
AGACCTGGGTGATCATCGCAGGTCAGACCGTTGGGCAGATAATGCTACTATGGGTAGAAGTCCAGGGGAAATACGGCGACTCCCTTCAGATCGTTGGAACGACACTGGAAACCGTGAACCTACCTATGATGCACGCCGTGAAAGTAAATGGGACACTCGATGGGGACGAGAGGACAAAGATATGGATAATCGCCGTGAAA
AATGGTTGGAATCTAGCAAGGATGGTGAAGGGCAGCGAGAGAAAGTTCCATCTGTGATAACTGACAATATTAAGGATTCTGAAAGGGAAGGTGAACATTATCCTCGTCCTTGGAGGTCAAATTCATTACAAGGCCGCGGTCGAGGTGAAGCACCCTACTTATCAGTTCCAACTCCAAACAAGCAGGCTCCGGGATTTAGC
CTTGGTAGGGGACGAGGTGATGGGGTGAGCCCAGGGTTTAGTGCTGGTCGTGGCAGAGGCATTTTTAGTGGTAGCAGTTTGATTTCTAATCCCTCAACCTATAGTTCACTTGGTGCACCTTCAGAAAGGTGGGATACTAATCTGGGTAACTCATCCTCGTTAAAGTATTATAGGGCGAAATTATTGGATATTTATCGGAA
ATGTGGCATGAAACAACACACTTTTGCAAGACTTCCGGATGGATTTTGTGAGATTCCCTTGCTTACACAAGTAGAGGCATTAGAACCATTGGCTCTTTATGTTCCCAGCCAAGAGGAAGAGGCTGTTTTAGAAGGAATTGATAAGGGAGAGATAGTTAGTAGTGGTGCACCTCAGTTTTCTAAAGATGGGGCACTTAATC
GAAACCGAGATGATACGGTTCGCAGTAGAAGGCAAAGAACTGGAAGTAGGGATGATGGGATATCCACAAATGATTCTCACAAGGAAGAGAATGCCAATGATTCTAAAGCTGATTATAGTCATCATCAAGAGACCGAGGCAGTTGAGAAGAACATAGAATTCTTGCCTGTGAATCTGAAGATCGGAGAATTTCGAGAACAG
CAGGCATTACGAGATCGTTGCATGGGCTATGAGGGTTCCGAGATTGAAGAATCTCGTTCTAAGCATAGAAATGATTCAGCTAAACTATACAAAGATGTAAGTTATAGTCGAGATTCCTCTGCTCACACTGATGGGTCTTGGAGGAAACAAGCAGTTGGAGAAGAACTCCAGGGACCACTGCATAATTGGCAGGATTTTAA
GTCTGAAATTCACCCTCCAAGATCTGATGCCAAGGATGCAATCTGGTCTACAAGGCCAGCATTGGGCAAAGATCCCAGTATTGATCATGAAAGAAATTTACTGGGAACAATCGTTTCTAGGGAAGATGGGACAGTATGGCACCACCATGAAGTTCTACAAGCTGATTCCAATCGTCTTAAACACCAATCATCAATGGAGA
GCAACAGGATGCTTGTTAGTGAAGGTACTTACATGGAACGGGAGAAGGAAGGCACTCAAGAAAGCATTCGACACATTCCACCAGAAGAATTGTCCCTATATTACAGAGATCCCCAAGGTGCTATTCAGGGTCCATTCTCAGGAGCTGATGTGATTGGTTGGTTTGAAGCTGGATATTTTGGCATAGATTTGCCAGTTCGT
CTAGTCAATGCCTCGGTAAACTCTCCTTTCTTTTCACTAGGAGATGTCATGCCACACTTGCGGATGAAGTCAAGAGCTCCTCCAGGGTTTGGTACCCCAAAACAAGGGGACGTGGCAGATTCAACCATTAGAAATAAATTTGGCAGCCATGGAAATGTGCAAGCAAACATTATTGGCAGTGGCTGTGATCTTTCTATGAA
TGACCAAAAAGATACAAGGGAGATAGCAGGAGCTGAGAAAAAGTTTATGGAATCTCTTATTAGTGGAACTTTCAACAGTCCTCATCCTGTGGAATCTTTTAACCTTAAAGAAGGAGGGCCACGTGGATTTCAAGGGCTTAGTCCTGGGGGGTCTTCATCACTTGGGACAGATGGTGTGTTGGACATGAATTATGCAGTGG
GACGGGCAGTGTCACCATACCCTTCCATGGAAAGACAAAAATCTCTTCCAAACGTTTTTCCCTATCGATGGTCAGCAAGAGATGCACCACCTCTGGTAACTAACTCAGAGACTGTTGCTGATAGTGTGAGGTCATTACCGCAACTGTCTAACATGACAGCAGATGCTTCATCTACCATCTCTCATGGCAGTCAACACGCA
GACCTTATGTCTATTCTGAAAGGTGCAGCAGACCTCAGTGGTGTTTCACAAATAAATAACGCTGTTAAACAATGGGCAAATTATGGTGATGTGCAGTCTCGTGGTAGTCTTGGTCATGGCAGTGTGGATATTTCTCATCAAGATCTGCTAGATGTGCATCATCTACAGCGGTTTGCTCCTATTCAAACAGGATTTCAATT
CCAACCCCAGAGGCAACAGCAGCAACACCAGCCACTTATGCAACGTGTAATGTCACTGCCCTCTGAAAATCTCTCTGGTGGAATGCCATTGGAACAGCTTTTGCCCTCTGGCCTCTCACAGGATCCTGTGACTTTAAATTTAATTCAAAAGCAGCAGCAGCAGCAGCAGCAGCAACAACATCAACTACTACTTTCTCAGC
TTCAGTCACGTTCTCAGGCTTCATTGCCATCTCATG
>TRINITY_DN119714_c3_g2_i5 from sample A3 / Example unspliced isoform:TGAACTCAAAGCACTTTGACTTGTGCCCTGCTGCTCTTCCTCCTTTCTTACTCGCTCGTTCCAGGGAAACTCTGTATTGGATGCATGCCTCATAGCAAGGTTGCCTGCAAGACTTCACCACCAAGGCCTACGAACAGATTGTTCGTAAGATCTGCAGGGAGAATGGTTTCATTTTTGACGAAGTGCGTCTCGATGCTGAT
CACTGTAAAGTGCTAGTTAACATTGAACATCAGAGCCCTGACATTGCCCAGGGCTTTCATTTGGAGCCGGTGACCAGGGTGACATGTATTTAATTTTGGAGCCGGTGACCAAGAGGCTGAGGAGATTGAAGCCAGTGACCAAGGCGATTCATAAAGAACGAAAATGAGAAGTAAAAAAATTATGTTCGTAGGTTAGTACC
TACTCTCGCTTCGTTTTTATGATAATTTTATATATATATATATATATATTTTGTTTTTTTTTGTTTTTCAACTTTTAAATAAATCACATACCAATGAGAGAGCATTGCATATCGTGATCTATCTATTACCCTCATCCATTATCCCCCATCTACAAGCTCTATTCTGCACTTTGTTGTTTAAGGGTTTTGGCGTCCTCTGC
TGTGCGAACCTCTTTTTAAGAAGACCTAGAAGATCATGGCCGACAGCAAACCCGAGCTATCTCCGAATGCTCTGCATCGCATGGAGTCCTTCAAGACTAGAGATCTGCACGGGCCTGAAAACTCCATTCCCCTCTCCCCACAGTGGCTGCTTCCAAAGCCTGGGGAGAATAAATCTGTAGCAGCAACAGGGGATCCCCCT
GTTAATTGCAGTCCCATACATGGCAATCGCACTGATTTCGTAGCTAAAGTATCTGGGAATGGGGATGAGATCATTGATACAGAGAAGAGGAAAGATGTTTGGCGATCTCCCTTGGTGGAAGCTGAACGCCGTGAGAACTGGCGAGATGAAGAAAGAGATAATACTAACATTCGTCGGGACAGGTGGAGAGAAGGCGACAA
AGACCTGGGTGATCATCGCAGGTCAGACCGTTGGGCAGATAATGCTACTATGGGTAGAAGTCCAGGGGAAATACGGCGACTCCCTTCAGATCGTTGGAACGACACTGGAAACCGTGAACCTACCTATGATGCACGCCGTGAAAGTAAATGGGACACTCGATGGGGACGAGAGGACAAAGATATGGATAATCGCCGTGAAA
AATGGTTGGAATCTAGCAAGGATGGTGAAGGGCAGCGAGAGAAAGTTCCATCTGTGATAACTGACAATATTAAGGATTCTGAAAGGGAAGGTGAACATTATCCTCGTCCTTGGAGGTCAAATTCATTACAAGGCCGCGGTCGAGGTGAAGCACCCTACTTATCAGTTCCAACTCCAAACAAGCAGGCTCCGGGATTTAGC
CTTGGTAGGGGACGAGGTGATGGGGTGAGCCCAGGGTTTAGTGCTGGTCGTGGCAGAGGCATTTTTAGTGGTAGCAGTTTGATTTCTAATCCCTCAACCTATAGTTCACTTGGTGCACCTTCAGAAAGGTGGGATACTAATCTGGGTAACTCATCCTCGTTAAAGTATTATAGGGCGAAATTATTGGATATTTATCGGAA
ATGTGGCATGAAACAACACACTTTTGCAAGACTTCCGGATGGATTTTGTGAGATTCCCTTGCTTACACAAGTAGAGGCATTAGAACCATTGGCTCTTTATGTTCCCAGCCAAGAGGAAGAGgtaaaggaatttctttctttcttgaaaatactttcattaaaattggatatttttcttcatgtcttgttaataatatcag
tatgtcaagttgaacagcttaacactagaagatcttgctgaagatgtttcttttcgccattttcattagGCTGTTTTAGAAGGAA