sp|Q9SJ40|VPS11_ARATH ----> Vacuolar protein-sorting-associated protein 11 homolog
Intron 1 GTATCATTCA ... TCTTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 15.87 | 53 | 0 | 10 |
| A2 | 10 | 45 | 0 | 5 |
| A3 | 10.2 | 44 | 0 | 5 |
| A4 | 15.69 | 43 | 1 | 8 |
| A5 | 26.47 | 25 | 0 | 9 |
| A6 | 23.53 | 13 | 0 | 4 |
| A7 | 20 | 24 | 0 | 6 |
| A8 | 30.77 | 9 | 0 | 4 |
| A9 | 20.83 | 19 | 0 | 5 |
| A10 | 19.61 | 41 | 0 | 10 |
>TRINITY_DN100239_c0_g2_i2 from sample A4 / Example spliced isoformCGTTAATTACGCCCGGAGAGAGCGTGGCACAATTTCACTAAGGGTAACATCAAAAAGAAGAAAGGGAAAGTCATGCATCTGAATGAACTTTCATAATCAGTACACAGAGCCTAAATCTGCTAAATAAACAATCCCCGGAAGGCGGAGGCTCTAAATTCAAAGTTTGTATGGTAATGGAGATCGTAGTTCGTCTGTAAGAA
TTCTGGATCATCTATAAGAATTATGGATCATAGAAATTATCAGTTCATGTAAATTTCAATTTGCCGCGAAAAAGAAGATGAAAGCGAGGGTTTGATCGCAGAAAGGATTTTGGGGTTTGAACAAGCCATTAAACATGTATCAGTGGAGAAAATTTCAGTTCTTTGAAGAGAAGGTCCCCGGGACTTCTGTTGCAGAGGAA
CTGAAAGAGAAGGTGGTGTGCTGCTCCAGCGGCCGAGGCCGCATGGTGGTTGGATCAGAAGATGGGATGGTGCACGTGCTGGATCGGGGTTTAAAGCTCAATTACAGTTTTCAGGCTCATAGCAGCAGCGTCCGGTTCATTCAGCAGCTCAAGCAACGGAATATACTGGTAACTATAGGAGAAGATGAAACAGCATCACC
TCAACTTTCAGCAATGTGTCTCAAGGTCTTTGACCTGGACAAAATGCAGTCAGAGGGATCAAGTACCACAGGCCCTACATGCATCCAAATCTTGCGAATTTTTACCAACCAATTTCCTGAAGCAGAGATTACATCATTTCTAGTGTTTGAAGAAGCACCTCCTATATTAATGATCTCTATAGGAGTAGAGACCGGTTATA
TTTATTGTATAAGAGGAGATGTTGCTCGTGAACGTATTGTACGCACAAAGCTACAAGTTGATGAATCTTCAAATGGCAGTCGATTTCCTGTAACAGGACTAGGATTCCGAGTTGAGGGCCCAGCGCTTCAGCTTTTTGTTGTAACGACAACTTCAGTGAGCCTTTTTGATATGCATCACCAGCCTCCCAGGAGGCACATC
TTGGATCAGATAGGATGTGGAAGTAATAGTGTTAGCATGAGTGATAACCAGGAATTGGTTATTGGGCGGACTGAGGCTGTATATTTTTATGAAGTTGATGGGCGAGGCCCTTGCTGGGCATTTGAAGGAGAAAAGCTCTTTCTTGGATGGTTTCGAGGATACCTGTTGTCTGTTATTGCAGATCAAAGGACAAGTAGGAA
TGTGTTCAATATTTATGATCTGAAAAACCGTTTGATTGCCTACAGCTTACCGGTTGGAGAAGTTACACACATGCTTTGTGAGTGGGGTAATATCATCCTCTTAACAAGTGACCATAAAGTTTTATGCATAGGAGAGAAAGACATGGAAAGTAAACTGGACATGCTTTTCAAAAAGAATTTATATACTGTTGCCATAAATC
TTGTCCAAAGTCAACAAGCAGATGCAGCAGCCACAGCTGAAGTACTGCGCAAATATGCAGATCACTTGTATAGCAAGCAAGATTATGATGAAGCCATGGCACAATACATTCGTACTATTGGTCAACTAGAACCTTCTTATGTCATTCAAAAGTTTCTTGATGCCCAGCGCATTTATAATCTTACTAGTTACTTGGAAAAA
CTACATGAGAAAGGTTTGGCCTCCAAAGATCATACAACTCTTCTCTTGAATTGTTATACAAAACTCAAGGATGTAGCAAAGCTGGATGAGTTCATCAAAGGTGAAGGTGAGCACCGATTTGATGTTGAAACAGCTGTAAAAGTTTGTCGCGGGGCAGGATATCATGAACATGCAATGTATGTTGCAAAAAAGGCTGGGAA
GCATGAATGGTATTTAAAGATACTACTAGAGGATCTTGGCAGTTATGATGAGGCTCTGGAGTATATCTCTAGCCTTGAATCAGTTCAAGCCGCAATTACAGTGAAGGAATATGGTAAGATTCTTGTGGAGCACAAATCAGATCAGACTATTGCCATTCTTATGAAACTTTGCACTGGTGATGGTGGATCAGTTGCCAATC
TTTCTGACAATCTCATTCCTGGCAAGTTGCCTTCACCAATTGATTTTATAAATATTTTTCTTGACCATCCATTATATCTCATGACTTTCCTCGAGAAGTACATCAGTAAGGTCAAGGACTCACCTGCCCATGTTGAAATCCATAACACTCTTCTGGAGCTATACTTGTCTGATGATCTTTGTGCCCCGTCTTTTTCCCGA
TCTGTTGTCTGGGGTATGGACACTTCTGGAGTTGGCTCAAGTAGGAACACTTTTGGATTGCCACACAAAGGAAATAGGGATATGGGCATGATTGCAAAGGGTCAAGAATCTGTTGATACAGATGAACGCACAGAAAGGCTGAAAAAGGGATTGTCCTTGCTTAAGAGTGCATGGCCTTCTCATGAGGATCATCCTCGTTA
TGATGCAGATCTTGCAGTTGTTCTTTCTGAAATGCATCAGTTCAAGGAAGGTCGGTTATTTCTATATGAGAAAATGAAACTTTACAAAGAAGTTATATCTTGTTATATGCAAGATTCAGACTATGAAGGATTGATTGCTTGTTGCAAGAGGCTGGGTGATTCAAGCAGGGGTGGAGATCCATCTCTTTGGGCTGATGTGC
TTAAGTACTTTGGAGAGCTTGGTGAAGATTGTTCAAAAGAAGTTAAAGAAGTACTGGTGTACATTGAAAGGGATGATATCTTGCCACCTATTATTGTTTTGCAGATTCTTGCCAAGAATCCATATCTCACACTTTCTGTTGTTAAGGATTATGTTGCACGGAAGTTAGAGCAAGAGTCCAAACATATTGAAGATGATCGG
AAAGCTATTGAGAAGTATCAGGAGGAGACTGCAGCTATGCGGAGAGAGGTACAGGAACTCCGTATGAATGCAAGGATTTTTCAGCTGAGCAAGTGCACTGCATGTACATTTACTCTTGATCTTCCCGCAGTCCATTTTATGTGCATGCATTCATTCCATCAACGTTGTCTTGGTGACAATGAGAAGGAATGCCCTGTTTG
TGCTCCTCAGAACAGAACATTGCTTGAAATGAAGAGGAACTTGGAACAAAATGCCAAGGATCATGACAGATTTTTCCAACTTGTTCGAAATTCCAATGATGGTTTTTCTGTGATTGCGAATTATTTTGGGAGGGGGATTCTGAACAAGGCAAAAAATGGCACCTCAAGCATGAGCAGATCAAGCACTGGTCCGTCTAATG
GATTTTGAAGGAAATTATGCTTTTCATCGTGTGTGATCCCCATGTCTCTAGTTGATGAAGAAACAGATCTGTTGAATATGTTGTGTCAAAGACTCAAATCCAATCAAACCATTTTGCACTTCAGAAAGCAAACCGGATCTCATTCACAGTTGGTGCTGAGACAAAGTTGATTTAAATTGATTTCTAATTTTATAATGCTT
GTGTATGCGTGTACAGATGAGAATTGCTTCACAAGTTGTTGCATGGTAATCAGCAACTTGAACACTTAAGCGGAGTTGGAAACTAAAGTGGCTTTCTAGTTATTGAGAAATGATGGACAAACTTTCCATCCCAGATCATCCTGGATTTCTGAATCTTTTTACATTGATGGAGTTGATTTGCAAGCTTACAATGGAGTTTC
AGAATTCAAAGTCTACTTATTCCACCTGATTGTGGCCACCGAGTATGTTTTGTTGCTAACAGGCTTTCCTATTTGGAACTTGAGCCAGAAACTCAAAAAATGACCTTCACTTGTGTGCTCACCATTTCATTAGAGATTTGTAATTTTATAGCGTGGAAGTGAAGCTTGCTTAGTGTTGGTGTTGCGCTTGCCAAGGGAAA
GCAAAGCATCCAAGGCATGACTATGGCCCAAGTGTGCCAATTAAGTGTCTACCTTTTTGAGGTTCTCATGATAACAAAATTGTCTATTTTGTGTTCCATCTTTTTCAATCATTGGTATTAGAAGAGAAGCTTAAATGCAAATTACACTTGGTTATTATTTTTCCTTTATATTAATAGTATTGTGTCTCTTATTGGACATG
TGTTTGTTGTCTGCTGTATATTCTCCAGCACTGAGAATAAATCGACATTGAAGTTCCACTTTATGCTCGTTAGTTATTTTATTATTTTTTACCTTAGTCATCGCTTT
>TRINITY_DN100239_c0_g2_i1 from sample A4 / Example unspliced isoform:CCAACCAATTTCCTGAAGCAGAGgtatcattcatgtcaagttgtaatgtcaaatattatgtttaaattacttggattttgttttcttgtctttgtttttgcatttagttgaagtctcactggaacaaatttggtttcaaatggcagcttctctttgtgaatttggaatgtgtgttacattgaaaaacaaatacagttaat
gtggtggaagcttgtctatagtttgcaaatattcgggcatagctttgatgtgttatattcatcttttgcagATTACATCATTTCTAGTGTTTGAAGAAGCACCTCCTATATTAATGATCTCTATAGGAGTAGAGACCGGTTATATTTATTGTATAAGAGGAGATGTTGCTCGTGAACGTATTGTACGCACAAAGCTACAA
GTTGATGAATCTTCAAATGGCAGTCGATTTCCTGTAACAGGACTAGGATTCCGAGTTGAGGGCCCAGCGCTTCAGCTTTTTGTTGTAACGACAACTTCAGTGAGCCTTTTTGATATGCATCACCAGCCTCCCAGGAGGCACATCTTGGATCAGATAGGATGTGGAAGTAATAGTGTTAGCATGAGTGATAACCAGGAATT
GGTTATTGGGCGGACTGAGGCTGTATATTTTTATGAAGTTGATGGGCGAGGCCCTTGCTGGGCATTTGAAGGAGAAAAGCTCTTTCTTGGATGGTTTCGAGGATACCTGTTGTCTGTTATTGCAGATCAAAGGACAAGTAGGAATGTGTTCAATATTTATGATCTGAAAAACCGTTTGATTGCCTACAGCTTACCGGTTG
GAGAAGTTACACACATGCTTTGTGAGTGGGGTAATATCATCCTCTTAACAAGTGACCATAAAGTTTTATGCATAGGAGAGAAAGACATGGAAAGTAAACTGGACATGCTTTTCAAAAAGAATTTATATACTGTTGCCATAAATCTTGTCCAAAGTCAACAAGCAGATGCAGCAGCCACAGCTGAAGTACTGCGCAAATAT
GCAGATCACTTGTATAGCAAGCAAGATTATGATGAAGCCATGGCACAATACATTCGTACTATTGGTCAACTAGAACCTTCTTATGTCATTCAAAAGTTTCTTGATGCCCAGCGCATTTATAATCTTACTAGTTACTTGGAAAAACTACATGAGAAAGGTTTGGCCTCCAAAGATCATACAACTCTTCTCTTGAATTGTTA
TACAAAACTCAAGGATGTAGCAAAGCTGGATGAGTTCATCAAAGGTGAAGGTGAGCACCGATTTGATGTTGAAACAGCTGTAAAAGTTTGTCGCGGGGCAGGATATCATGAACATGCAATGTATGTTGCAAAAAAGGCTGGGAAGCATGAATGGTATTTAAAGATACTACTAGAGGATCTTGGCAGTTATGATGAGGCTC
TGGAGTATATCTCTAGCCTTGAATCAGTTCAAGCCGCAATTACAGTGAAGGAATATGGTAAGATTCTTGTGGAGCACAAATCAGATCAGACTATTGCCATTCTTATGAAACTTTGCACTGGTGATGGTGGATCAGTTGCCAATCTTTCTGACAATCTCATTCCTGGCAAGTTGCCTTCACCAATTGATTTTATAAATATT
TTTCTTGACCATCCATTATATCTCATGACTTTCCTCGAGAAGTACATCAGTAAGGTCAAGGACTCACCTGCCCATGTTGAAATCCATAACACTCTTCTGGAGCTATACTTGTCTGATGATCTTTGTGCCCCGTCTTTTTCCCGATCTGTTGTCTGGGGTATGGACACTTCTGGAGTTGGCTCAAGTAGGAACACTTTTGG
ATTGCCACACAAAGGAAATAGGGATATGGGCATGATTGCAAAGGGTCAAGAATCTGTTGATACAGATGAACGCACAGAAAGGCTGAAAAAGGGATTGTCCTTGCTTAAGAGTGCATGGCCTTCTCATGAGGATCATCCTCGTTATGATGCAGATCTTGCAGTTGTTCTTTCTGAAATGCATCAGTTCAAGGAAGGTCGGT
TATTTCTATATGAGAAAATGAAACTTTACAAAGAAGTTATATCTTGTTATATGCAAGATTCAGACTATGAAGGATTGATTGCTTGTTGCAAGAGGCTGGGTGATTCAAGCAGGGGTGGAGATCCATCTCTTTGGGCTGATGTGCTTAAGTACTTTGGAGAGCTTGGTGAAGATTGTTCAAAAGAAGTTAAAGAAGTACTG
GTGTACATTGAAAGGGATGATATCTTGCCACCTATTATTGTTTTGCAGATTCTTGCCAAGAATCCATATCTCACACTTTCTGTTGTTAAGGATTATGTTGCACGGAAGTTAGAGCAAGAGTCCAAACATATTGAAGATGATCGGAAAGCTATTGAGAAGTATCAGGAGGAGACTGCAGCTATGCGGAGAGAGGTACAGGA
ACTCCGTATGAATGCAAGGATTTTTCAGCTGAGCAAGTGCACTGCATGTACATTTACTCTTGATCTTCCCGCAGTCCATTTTATGTGCATGCATTCATTCCATCAACGTTGTCTTGGTGACAATGAGAAGGAATGCCCTGTTTGTGCTCCTCAGAACAGAACATTGCTTGAAATGAAGAGGAACTTGGAACAAAATGCCA
AGGATCATGACAGATTTTTCCAACTTGTTCGAAATTCCAATGATGGTTTTTCTGTGATTGCGAATTATTTTGGGAGGGGGATTCTGAACAAGGCAAAAAATGGCACCTCAAGCATGAGCAGATCAAGCACTGGTCCGTCTAATGGATTTTGAAGGAAATTATGCTTTTCATCGTGTGTGATCCCCATGTCTCTAGTTGAT
GAAGAAACAGATCTGTTGAATATGTTGTGTCAAAGACTCAAATCCAATCAAACCATTTTGCACTTCAGAAAGCAAACCGGATCTCATTCACAGTTGGTGCTGAGACAAAGTTGATTTAAATTGATTTCTAATTTTATAATGCTTGTGTATGCGTGTACAGATGAGAATTGCTTCACAAGTTGTTGCATGGTAATCAGCAA
CTTGAACACTTAAGCGGAGTTGGAAACTAAAGTGGCTTTCTAGTTATTGAGAAATGATGGACAAACTTTCCATCCCAGATCATCCTGGATTTCTGAATCTTTTTACATTGATGGAGTTGATTTGCAAGCTTACAATGGAGTTTCAGAATTCAAAGTCTACTTATTCCACCTGATTGTGGCCACCGAGTATGTTTTGTTGC
TAACAGGCTTTCCTATTTGGAACTTGAGCCAGAAACTCAAAAAATGACCTTCACTTGTGTGCTCACCATTTCATTAGAGATTTGTAATTTTATAGCGTGGAAGTGAAGCTTGCTTAGTGTTGGTGTTGCGCTTGCCAAGGGAAAGCAAAGCATCCAAGGCATGACTATGGCCCAAGTGTGCCAATTAAGTGTCTACCTTT
TTGAGGTTCTCATGATAACAAAATTGTCTATTTTGTGTTCCATCTTTTTCAATCATTGGTATTAGAAGAGAAGCTTAAATGCAAATTACACTTGGTTATTATTTTTCCTTTATATTAATAGTATTGTGTCTCTTATTGGACATGTGTTTGTTGTCTGCTGTATATTCTCCAGCACTGAGAATAAATCGACATTGAAGTTC
CACTTTATGCTCGTTAGTTATTTTATTATTTTTTACCTTAGTCATCGCTTT