sp|P0CZ23|ACOX3_ARATH ----> Acyl-coenzyme A oxidase 3, peroxisomal

Intron 1 GTAAGAAGCA ... GTTTGTGTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	21.95	16	8	1
A2	18.28	38	5	12
A3	16.33	41	11	5
A4	37.5	10	5	7
A5	17.95	16	4	3
A6	16.13	13	2	3
A7	5.26	18	0	2
A8	21.57	20	7	4
A9	21.74	18	5	5
A10	20	24	11	1

>TRINITY_DN102060_c6_g1_i2 from sample A4 / Example spliced isoform

GTACAATCCAGTTTCTCGGTACAAAGCGACACCATGAAAAGTGGCTGCAGGATACGGAAGACTTCGTTGTTAGAGGATCCTTTGCTATTACCGAGCTTGGACATGGCAGTAATGTCCGGGGAATCGAAACAATCACCACCTATGATCCCTCCACTCAAGAATTCATTATCACTACACCTTGTGAATCTGCTCAAAAGTAC
TGGATCGGAGGGGCTGCAAATCATGCCACCCATACTGTAGTTTTCTCCCAGCTTATTATCAATGGAAAGAATGAAAGTGTGCACGCATTAATTGTACAAATACGAGACAAAGATGGGAAGATATGTTCAGGTGTACGAATTGCCGATTGCGGTCACAAAATTGGTTTAAATGGAGTCGATAATGGACGAATTTGGTATAT
AATTTTCAGCAGTATCTTTCGTAGGATTTAGCAAGG

>TRINITY_DN102060_c6_g1_i8 from sample A4 / Example unspliced isoform:

GTACAATCCAGTTTCTCGGTACAAAGCGACACCATGAAAAGTGGCTGCAGGATACGGAAGACTTCGTTGTTAGAGGATCCTTTGCTATTACCGAGCTTGGACATGGCAGTAATGTCCGGGGAATCGAAACAATCACCACCTATGATCCTTCTACTCAAGAATTCATCATCACTACACCTTGTGAATCTGCTCAAAAGTAC
TGGATCGGAGGGGCTGCAAATgtaagaagcattctgtttcttgttcagtaatagcaattataatttatttgacatattcaatccagtcaaacatttttgtttttgatggttttgtttgtgtagCATGCCACCCATACTGTAGTTTTCTCCCAGCTTATTATCAATGGAAAGAATGAAAGTGTGCACGCATTAATTGTACA
AATACGAGACAAAGATGGGAAGATATGTTCAGGTGTACGAATTGCCGATTGCGGTCACAAAATTGGTTTAAATGGAGTCGATAATGGACGAATTTGGTTTGACAAAGTGCGTATTCCACGTGAAAATCTCTTGAACTCTGTTGCCGATGTGTCTCCAGATGGCAAGTATCATAGTCGAATAGATGATCCTGACCAGAGGT
TTGCAGCTTTCATGGCCCCTTTAACAGGTGGTCGTGTGACCATTGCTGTTAGTGCTGTATATCAATCCAAGATTGGATTAGCAACTGCAATCCGATATTCATTGACAAGACGTGCTTTTCATCTCCATCCTGATGAGCCAGAAGTATTGTTGCTTGACTACCCAGCCCATCAGCGTCGTTTGCTTCCGTCGCTTGCCAAA
ACATATGCTATGAGTTGTGCGGCAAATGACCTTAAGAGGATATATTGGAAAAGAACTCCTTCGGAC