sp|O80536|PIF3_ARATH ----> Transcription factor PIF3
Intron 1 GTCTGTTTTT ... TTTTTGGCAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 41.67 | 7 | 5 | 0 |
| A2 | 40 | 3 | 2 | 0 |
| A3 | 75 | 2 | 6 | 2 |
| A4 | 75 | 1 | 3 | 2 |
| A5 | 66.67 | 1 | 2 | 0 |
| A6 | 57.14 | 3 | 4 | 0 |
| A7 | 53.85 | 6 | 7 | 1 |
| A8 | 50 | 4 | 4 | 0 |
| A9 | 50 | 1 | 1 | 0 |
| A10 | 72.73 | 3 | 8 | 4 |
>TRINITY_DN30341_c0_g1_i2 from sample A3 / Example spliced isoformCCAAGTTATGGCTGTTTCTGAAGCTTTCGAGTCTGATTACGGGAGAGTGAATAATATTAATAATAACAATAATGTGTCAGCCGATACTCAACTCTCTTGTGAAACTGCTGCAACTTCTTCGTCTGGAGGTTCCATGAGCAGTCCAAGTAAGAGTGAGAAGGTAATCGATTCGGGCAAGAGGAAAGTGCTCATGGTTGCCA
AGGATATTGAGTGCCACAGTCAGAAGTCGCAAGAAGATTCTGGTGAAAATTTTAAACAGTGCTCGACTGGGACATCTTCTTCAAAAAGAAGCAGGGCAGCTGAAGTTCACAATTTGTCAGAAAAGAGGCGGAGGAATAGAATCAATGAAAAAATGAAAGCCCTTCAGAATCTCATTCCCAACTCTAATAAGACTGACAAA
GCTTCCATGCTGGACGAAGCAATCGAGTACCTTAAGAAGCTTCAATTACAAGTGCAGATGCTTTCTGCAAGGAGTGGAATTGATGTTTCATCCATACGATGGTTGGCGCAGATGCCACACTTGCAGATACAGCAAATGCCAAAAGCATGTGTGACCACAGACCAGCATGCAGGAGTTTCCCTAAGTATGCCTGTGGGATC
AGGGCTTATAAACACTAACCAAGCTAGCGAAAAGAGGCCTTTGCATGATCTATATAATTCTGCAGCCCTTGGCAATACCGCCATTCCTATAAATTTGTCGTCAGCCAGGATTGATGATCATCAGGCCTGCAAAATGGATCGTCCTCAAGGCCACTTTACTTTGCCTCAATTGCCACCAACGACTCAGGAAGTTCATGCTG
CACTTTCCTTGC
>TRINITY_DN30341_c0_g1_i1 from sample A3 / Example unspliced isoform:CCAAGTTATGGCTGTTTCTGAAGCTTTCGAGTCTGATTACGGGAGAGTGAATAATATTAATAATAACAATAATGTGTCAGCCGATACTCAACTCTCTTGTGAAACTGCTGCAACTTCTTCGTCTGGAGGTTCCATGAGCAGTCCAAGTAAGAGTGAGAAGGTAATCGATTCGGGCAAGAGGAAAGTGCTCATGGTTGCCA
AGGATATTGAGTGCCACAGTCAGAAGTCGCAAGAAGATTCTGGTGAAAATTTTAAACAGTGCTCGACTGGGACATCTTCTTCAAAAAGAAGCAGGGCAGCTGAAGTTCACAATTTGTCAGAAAAGAGGCGGAGGAATAGAATCAATGAAAAAATGAAAGCCCTTCAGAATCTCATTCCCAACTCTAATAAGACTGACAAA
GCTTCCATGCTGGACGAAGCAATCGAGTACCTTAAGAAGCTTCAATTACAAGTGCAGATGCTTTCTGCAAGGAGTGGAATTGATGTTTCATCCATACGATGGTTGGCGCAGATGCCACACTTGCAGATACAGCAAATGCCAAAAGCATGTGTGACCACAGACCAGCATGCAGGAGTTTCCCTAAGTATGCCTGTGGGATC
AGGGCTTATAAACACTAACCAAGCTAGCGAAAAGAGGCCTTTGCATGATCTATATAATTCTGCAGCCCTTGGCAATACCGCCATTCCTATAAATTTGTCGTCAGCCAGGATTGATGATCATCAGGCCTGCAAAATGGATCGTCCTCAAGGCCACTTTACTTTGCCTCAATTGCCACCAACGACTCAGgtctgtttttata
attattcacttgatggcatgtttagttttgccagaaattctacaagcaaggtcatcgattctctctttttcctgtttttggcagGAAGTTCATGCTGC