sp|A2ZIW7|SGS3_ORYSI ----> Protein SUPPRESSOR OF GENE SILENCING 3 homolog
Intron 1 GTGAGTGTTG ... ATGGGGGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50 | 21 | 19 | 23 |
| A2 | 38.78 | 30 | 14 | 24 |
| A3 | 52.81 | 21 | 21 | 26 |
| A4 | 50 | 16 | 17 | 15 |
| A5 | 38.78 | 15 | 10 | 9 |
| A6 | 49.02 | 13 | 7 | 18 |
| A7 | 40.3 | 20 | 16 | 11 |
| A8 | 57.58 | 7 | 8 | 11 |
| A9 | 38.05 | 35 | 8 | 35 |
| A10 | 42 | 29 | 11 | 31 |
>TRINITY_DN129309_c5_g4_i8 from sample A1 / Example spliced isoformTGGGAATGCAAGGATTTTGCGTTTTAGGGATCTTTCATTGCACTCCTTGTAGTCGAGAATAAAAGAAGAGGACAGTATAAACCCTACTATCAATGTCAAACCCTACGTATTAGGGTTTGTTGGTTTCAGAAGAAATTAGCCACCCAGGACCGTGACTTTCGGTGTCTGAATCGAATTAGCGGAGTTTGAAGTTGGAATTT
CTCGAAAGATTTAGGTTACAACTGCTCAGCTCCTTGCAAAGAACAACTGCTTCAAAGAGCTCAGGCTTGCAATTTTGAGAGGTTCGATCATACGACCTCTGTCGTCGACAGATTCTTCAGATAATCATTCATGCGGCGTGCTTTTATATTCCCTGACACGCAGTTACGCTTACGGACGGCGAATTAATTGAGGAATGCAG
TTCCTAATTATAGGAGCATAAGCTGAATATTCGCAGGCGAGTGGCTGAAGTTGAAAGATTCTACAGTCATGTCTGCCACTGCCCAGGATGTCGCGATCGCTTCATCATATCGAACACAAGGCAGACGGCAAGAGACGGGGAAAGGTTTAGCCGAGGACGGGATTTCTATCAAAAGTGCATCATGCGAGCGTTTCAGTATT
CGGTAAGGATATCACGTTTTGTCTTATCGTCTGCTTTCAAATACTTGAACACTATCTTCACTGTGGCACGCCATGATCCAATAAATTTGCATTTCCCAAGACTAACATTTAACTGTACAACTTTTAGAGAGACTATATTGCTCGTTCATGATATCTTATTATAATTAATTACGAAAGGATGTTTTTCCTTCAATTTTTTC
CGAGGTCTGGAGTGTAGACTATAAGGATGTATAGTTTTGAACTTTCGTCGATTCAGCTAAATAACATAATCTCGATCTCTTTCATTTCCTTTTGTGTATAACGAACTCTATCTCTTTCACTTTCTTTTGTGTATAACACTCATGCTTGTCACTCATCGTATGTCCTTGTTTATATACATATATTGCGAATTTCGTCATTT
CATTTGAAGGACGAAAAAACGGAAGTTCGGAATTATTTAAAATCTAAATTCAGTAAATAGTTCCAACTCATGTAGACAACCACCAGCTGAACATGTGCCTTCTAAAACCATTCCTACTAAAGTAATGTAGTTATTGCTTACGGTATATGATAAGTGTCTTTTGAACATAGTGAGGCATTCCTGATTTCCATAGATAATAT
TTCTAATTGCTGGATTTAAGTCGACATTCCTTTGGCTTATAAAACAGTACTAATTATCATGCTCCAATATTTTCCCAAACAGCACTAATTATCATGCTCCCATTTTTTCCCTGTATAATAACAGTACAATTAATGATCCCTTTTAGATTCATTTTTTTATCTACTTTTTCTTTTACTGATACAATGGTTATGTTATGTTG
CAACAGTTCATTAACTATATAGAAACGCATATTGCCCATTTCCTCAGCACATACAGATATTATGACAGAGCAAGGAAGAACTGAAAGTATTGCTCCCATCGAGCTAGAAAAGCACAAGTTTGAAAGTGAAGATTCAGAGGAGAAGAGAAGTAGAATCTCCCACTGTTTATCAAATTCTAGAAACTTCGATGGAATCATCG
ATATCGCTTTAGAAAAAAAAGGATAAAAAAGGATAGTACACGACGGGGCTGTCAAAAATGAAAACAGTGTCATCCATCTTAGTGAGTGAAACAAATAAGGAGTTAGGCTCAAAAACAGAACAGTACTAGTCATCATGCTCCCATTTTTTCCTGTACAATTCCAGCTAATTTTAGCTAGATAATAACAGTCCAGTTAATGA
TCCTTTTTAGATTCACTAATTCTATCTACTTTTTCTTTTACTCATACAATGTTTATGTTGCAACAATTCATTAGGTAGATAGAAACACATCTGGGCCATTTCCTCAGCACATACAAACACTATGACAGAACAAGGAAGAACCTAAAGTGCTGTTCCAGTTAAGCAGAAAAGCACAAATCTGAACTTGCATATTCAGAGGA
GAAGAAAAGTAGAATCTCCCTCTGTTTGTCAATTTTTAGTAACTTTGAGGGAGTCATCAATTTATCCCTAAGAAAATAAAAAGTAGTATGCCGTGAGACTGGGCGGTCAGAAATGAAAAACACTGTCATCCATCTTAGAGAGTGAAAAAAATAAGGAATTAGGCTCAAAACGAAAGCAAATCTGAAGCACCTTAGATTCC
TTACCAGTCTTCTAATTCTTTTATAACAATTTCATTAACAAAAAAATCTTATAACATTTTGGTTCAACAAAGAATTGATTATAGATTTCCTGATTGTGCATAGGAATATCTTCTCTTTATAAAATTTGAATAGGCACCTAAATCCAAATCCTTGGCATCTTTGATCAACAGAAAGGATTTAGCTCAAAAATGCATAGGTA
CCTCTTCTTTCCATATGTTTACGGATAATCTACTCGAGCGGACGTGAGCGTGATCTTCCTAGTCCAGGTGGATCTAGAACAATTGAATACAGAATATAGATCTACTTTCTTAGATCAATTAGAGATTAAAGTAGATGGATGCCTTACCTTCAGATTCACGAATCCTTCTCCTCTTTGTCGCTTCAAGCTCCGTGGTTGTC
AGATCTCAAGCTGCAAAACCTATCAAAGCACATAGAGACAAACAAACAGTAAAAGCACATCTAAACACTAATTGATCTAAGCACATAGTTAAGAAAGTGAGCTCTAAATATCATTAACACAAAGACATTTATGGAAAGAGATTATATTACTGTAAATAAGTGGGAAATACATAGAAGAGTGATGATTACAACCCAAGCCT
TAACACTGCAATCTTCCTCCAACAAGCCAAGCCAATGCCTCCAAAGGAAATGTATGCCTCCCAAGAGATGGATGGAGATCACCTAGGTTAATTCCACCAGCATGTAAGTGCTATAGAATTTCCTCCCCTTGGAATGGAGAGGAGCTTCATATTTATAAGACCAAGTGGATAGAGTAGGTTGAGGAT
>TRINITY_DN129309_c5_g4_i6 from sample A1 / Example unspliced isoform:TGGGAATGCAAGGATTTTGCGTTTTAGGGATCTTTCATTGCACTCCTTGTAGTCGAGAATAAAAGAAGAGGACAGTATAAACCCTACTATCAATGTCAAACCCTACGTATTAGGGTTTGTTGGTTTCAGAAGAAATTAGCCACCCAGGACCGTGACTTTCGGTGTCTGAATCGAATTAGCGGAGTTTGAAGTTGGAATTT
gtgagtgttgaactaacttggttagaaggattcgagttttgtttgtttgatttggagctgaaatcactactatatataaatgtatgtttctttgttttgctttgtgtgttcaaatgtatgggggaagCTCGAAAGATTTAGGTTACAACTGCTCAGCTCCTTGCAAAGAACAACTGCTTCAAAGAGCTCAGGCTTGCAAT
TTTGAGAGGTTCGATCATACGACCTCTGTCGTCGACAGATTCTTCAGATAATCATTCATGCGGCGTGCTTTTATATTCCCTGACACGCAGTTACGCTTACGGACGGCGAATTAATTGAGGAATGCAGTTCCTAATTATAGGAGCATAAGCTGAATATTCGCAGGCGAGTGGCTGAAGTTGAAAGATTCTACAGTCATGTC
TGCCACTGCCCAGGATGTCGCGATCGCTTCATCATATCGAACACAAGGCAGACGGCAAGAGACGGGGAAAGGTTTAGCCGAGGACGGGATTTCTATCAAAAGTGCATCATGCGAGCGTTTCAGTATTCGGTAAGGATATCACGTTTTGTCTTATCGTCTGCTTTCAAATACTTGAACACTATCTTCACTGTGGCACGCCA
TGATCCAATAAATTTGCATTTCCCAAGACTAACATTTAACTGTACAACTTTTAGAGAGACTATATTGCTCGTTCATGATATCTTATTATAATTAATTACGAAAGGATGTTTTTCCTTCAATTTTTTCCGAGGTCTGGAGTGTAGACTATAAGGATGTATAGTTTTGAACTTTCGTCGATTCAGCTAAATAACATAATCTC
GATCTCTTTCATTTCCTTTTGTGTATAACGAACTCTATCTCTTTCACTTTCTTTTGTGTATAACACTCATGCTTGTCACTCATCGTATGTCCTTGTTTATATACATATATTGCGAATTTCGTCATTTCATTTGAAGGACGAAAAAACGGAAGTTCGGAATTATTTAAAATCTAAATTCAGTAAATAGTTCCAACTCATGT
AGACAACCACCAGCTGAACATGTGCCTTCTAAAACCATTCCTACTAAAGTAATGTAGTTATTGCTTACGGTATATGATAAGTGTCTTTTGAACATAGTGAGGCATTCCTGATTTCCATAGATAATATTTCTAATTGCTGGATTTAAGTCGACATTCCTTTGGCTTATAAAACAGTACTAATTATCATGCTCCAATATTTT
CCCAAACAGCACTAATTATCATGCTCCCATTTTTTCCCTGTATAATAACAGTACAATTAATGATCCCTTTTAGATTCATTTTTTTATCTACTTTTTCTTTTACTGATACAATGGTTATGTTATGTTGCAACAGTTCATTAACTATATAGAAACGCATATTGCCCATTTCCTCAGCACATACAGATATTATGACAGAGCAA
GGAAGAACTGAAAGTATTGCTCCCATCGAGCTAGAAAAGCACAAGTTTGAAAGTGAAGATTCAGAGGAGAAGAGAAGTAGAATCTCCCACTGTTTATCAAATTCTAGAAACTTCGATGGAATCATCGATATCGCTTTAGAAAAAAAAGGATAGTACACGACGGGGCTGTCAAAAATGAAAACAGTGTCATCCATCTTAGT
GAGTGAAACAAATAAGGAGTTAGGCTCAAAAACAGAACAGTACTAGTCATCATGCTCCCATTTTTTCCTGTACAATTCCAGCTAATTTTAGCTAGATAATAACAGTCCAGTTAATGATCCTTTTTAGATTCACTAATTCTATCTACTTTTTCTTTTACTCATACAATGTTTATGTTGCAACAATTCATTAGGTAGATAGA
AACACATCTGGGCCATTTCCTCAGCACATACAAACACTATGACAGAACAAGGAAGAACCTAAAGTGCTGTTCCAGTTAAGCAGAAAAGCACAAATCTGAACTTGCATATTCAGAGGAGAAGAAAAGTAGAATCTCCCTCTGTTTGTCAATTTTTAGTAACTTTGAGGGAGTCATCAATTTATCCCTAAGAAAATAAAAAG
TAGTATGCCGTGAGACTGGGCGGTCAGAAATGAAAAACACTGTCATCCATCTTAGAGAGTGAAAAAATAAGGAATTAGGCTCAAAACGAAAGCAAATCTGAAGCACCTTAGATTCCTTACCAGTCTTCTAATTCTTTTATAACAATTTCATTAACAAAAAAATCTTATAACATTTTGGTTCAACAAAGAATTGATTATAG
ATTTCCTGATTGTGCATAGGAATATCTTCTCTTTATAAAATTTGAATAGGCACCTAAATCCAAATCCTTGGCATCTTTGATCAACAGAAAGGATTTAGCTCAAAAATGCATAGGTACCTCTTCTTTCCATATGTTTACGGATAATCTACTCGAGCGGACGTGAGCGTGATCTTCCTAGTCCAGGTGGATCTAGAACAATT
GAATACAGAATATAGATCTACTTTCTTAGATCAATTAGAGATTAAAGTAGATGGATGCCTTACCTTCAGATTCACGAATCCTTCTCCTCTTTGTCGCTTCAAGCTCCGTGGTTGTCAGATCTCAAGCTGCAAAACCTATCAAAGCACATAGAGACAAACAAACAGTAAAAGCACATCTAAACACTAATTGATCTAAGCAC
ATAGTTAAGAAAGTGAGCTCTAAATATCATTAACACAAAGACATTTATGGAAAGAGATTATATTACTGTAAATAAGTGGGAAATACATAGAAGAGTGATGATTACAACCCAAGCCTTAACACTGCAATCTTCCTCCAACAAGCCAAGCCAATGCCTCCAAAGGAAATGTATGCCTCCCAAGAGATGGATGGAGATCACCT
AGGTTAATTCCACCAGCATGTAAGTGCTATAGAATTTCCTCCCCTTGGAATGGAGAGGAGCTTCATATTTATAAGACCAAGTGGATAGAGTAGGTTGAGGAT