NA ----> NA

Intron 1 ATTTATTTCA ... TGGAATCAAC

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	75.38	64	231	161
A2	73.57	90	291	210
A3	72.21	76	250	145
A4	75.94	48	205	98
A5	77.62	94	388	264
A6	100	0	11	8
A7	83.33	1	9	1
A8	65	7	19	7
A9	100	0	14	5
A10	89.11	27	262	180

>TRINITY_DN134995_c3_g1_i7 from sample A1 / Example spliced isoform

GAAAAGCTTACTTCCGCCAGTTTTTTAAAATCACAGCTTCTAGAAGGTTTACATGATTTCTTAAAAAACATGAGTTTTTAGAAAATGTGTTTTATTTCATAAATGGAATCATAACGACTTTCTATAGTTTGCGCATGCGTCCGGAAATAAGAAAAGCTTACTTCCACCGTTTTTTAAAATCACAGCTTCTAGAAGGTTTA
CATGATTTCTTAAAAAACACGAGTTTTTAGAAAATGTGTTTTATTTCATAAATGTAATCAACAAAGTATGCACATGCTACGTCATAACGACTTTCTATAGTTTGCGCATGCGTCCGGAAATAAGAAAAGCTTACTTCCACCATTTTTTAAAATCACAGCTTC

>TRINITY_DN134995_c3_g1_i5 from sample A1 / Example unspliced isoform:

GAAAAGCTTACTTCCGCCAGTTTTTTAAAATCACAGCTTCTAGAAGGTTTACATGATTTCTTAAAAAACATGAGTTTTTAGAAAATGTGTTTTATTTCATAAATGGAATCAACAAAGTATGCACATTCTACGTCATAACGACTTTCTATAGTTTGCGCATGCGTCCGGAAATAAGAAAAGCTTACTTCCCCCGTTTTTTA
AAATCACAGCTTCTAGAAGGTTTACATGATTTCTTAAAAAACACTGAGTTTTTAGAAAATGTGatttatttcataaatggaatcaacTTTTATTTCATAAATGTAATCAACAAAGTATGCACATGCTACGTCATAACGACTTTCTATAGTTTGCGCATGCGTCCGGAAATAAGAAAAGCTTACTTCCACCATTTTTTAAA
ATCACAGCTTC