sp|O82265|SCC3_ARATH ----> Sister-chromatid cohesion protein 3

Intron 1 GTGTTATAGT ... TTGATTATAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	26.32	14	0	5
A2	0	20	0	0
A3	15.79	16	0	3
A4	5.88	16	0	1
A5	15.38	11	0	2
A6	6.52	86	1	6
A7	0	84	0	0
A8	3.75	77	1	3
A9	6.9	108	0	8
A10	5.32	89	0	5

>TRINITY_DN36542_c0_g2_i2 from sample A9 / Example spliced isoform

AAACAGCGGACAAATCTGCCATCTGCCCATCTACACCATTTCCGTTTTCAGCCAGCAGAACAAATCGCTAACAGGCAGAAGAAGAGGAAGAGCCATGGTTACCTGCAAAGTGGCCTTAGAGGAGACAGACCAGTCCATTGAAGACATACAACTCAAAGCTAAAGTTGGCGACAGAGTCAAAGTGAGAGGACCCTTGAAGG
TCTATCACGTACCCAAAACGCCAGAGTTCGATCTTGGGGGCATGGAGGGCGTAGTCAACGACTACGTGGGTCTATGGAAAGGACTTGTTTCATCATCAGAAGGCAGAGTTGGTTTCTCAAACAAACTCCATACATCAGATAATATATATCGTACAGCAGGGATAATTCTTGCAGTTCCTTGTTCCCAACTTTCAAGAATA
CTATCTGCAAAATATTCTAGCTGATTTATTAGATTATTACGTTTTTGTTTCAATGATACTGTAGCTGTTTCAGAAGGATTATCGCTATCCATTGATCTTAAACTCCAAGCAATATGCAAATTCATGTTCAAATGTACAAGACGAATTACCTCATCATCCAAACTTCTGAAACCTTTTATAAGACCAAGCATGCCTGAGGA
CGTAGTTTCTCTTGACCCAAACTTTGATAATTGCAGTTGATAAGGCCTTCTAAGATTTACTGTTAAGGAATACTCATCTTCAAACATCCATGCTTGTTTTATGGCAGATCTGAGCATGAGAACACGCTCATCTTCCAATTTTTTCATTATTCTGGGCAGAATTTTGTAAGTCTGCTTGGCTTTCAGTAGCATAGAATGGG
ATTGCCCCGGT

>TRINITY_DN36542_c0_g2_i1 from sample A9 / Example unspliced isoform:

ACTACGTGGGTCTATGGAAAGgtgttatagtaacattgccattttccccagctttctgctattcctctgtgaaacatcttcaaaactaaagggaagtatgtatctttgaattgtttagtatgatcactgatgattgactgaagatctgccttgattatagGACTTGTTTCATCATCAGAAGGCAGAGTTGGTTTCTCAAA
CAAACTCCATACATCAGATAATATATATCGTACAGCAGGGATAATTCTTGCAGTTCCTTGTTCCCAACTTTCAAGAATACTATCTGCAAAATATTCTAGCTGATTTATTAGATTATTACGTTTTTGTTTCAATGATACTGTAGCTGTTTCAGAAGGATTATCGCTATCCATTGATCTTAAACTCCAAGCAATATGCAAAT
TCATGTTCAAATGTACAAGACGAATTACCTCATCATCCAAACTTCTGAAACCTTTTATAAGACCAAGCATGCCTGAGGACGTAGTTTCTCTTGACCCAAACTTTGATAATTGCAGTTGATAAGGCCTTCTAAGATTTACTGTTAAGGAATACTCATCTTCAAACATCCATGCTTGTTTTATGGCAGATCTGAGCATGAGA
ACACGCTCATCTTCCAATTTTTTCATTATTCTGGGCAGAATTTTGTAAGTCTGCTTGGCTTTCAGTAGCATAGAATGGGATTGCCCCGGT