NA ----> NA
Intron 1 GTGAGTTACT ... ATCTTATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 53.85 | 3 | 6 | 1 |
| A2 | 47.83 | 6 | 3 | 8 |
| A3 | 85.71 | 1 | 8 | 4 |
| A4 | 33.33 | 2 | 0 | 2 |
| A5 | 100 | 0 | 0 | 6 |
| A6 | 62.5 | 3 | 9 | 1 |
| A7 | 75 | 3 | 7 | 11 |
| A8 | 86.21 | 2 | 9 | 16 |
| A9 | 58.62 | 6 | 13 | 4 |
| A10 | 45.45 | 6 | 4 | 6 |
>TRINITY_DN42636_c1_g1_i6 from sample A9 / Example spliced isoformTCCTTGACTATAAGGCCGTGTGGGGTTCTCATCATGAGCTTGGGCATTAACCATATTCTCATCATTCTCATCATTTTAATCTTGGGTTTCAACTGCCGATCAAATTATAAGATATTGAATTTGGATTTCTCTTACAATGATATTCCTTACCTGGTCTTCTGTGAATCCATGTCTTGGAAGCGCTGAACCGCTCGTTGTGC
TGTTTGGATGGATCTGCCCTGATAATGGTTTGTTCATCAATACACTTCTCCAAGCTATTCATCTAAAAGCAATCCTCTCATAATCCCTTTCATTCATCTGTAGTTTGTTAACAATGTTATGTTGTTTTCGTGTTCGATTCATTCATTCTCAACAAACAAAACCCCACATTGCCTTGCCTGACTGATGCAATGGTTATCTT
CTCCAAGTACATTCCTTCTCTTCTTCACCTACTCGTTACTGCGGAACTATCAACCATTCCCACACTTCACTTCGTTCAAGCTATCATTCTTCTCCACCGACACCCGCCAACAAACCCCCACAAGCAGAGTAGGCACACGCTGACCACAATCCCTGTTCAGATTTCTTACTTAACGAATGTGGCTTGTCTGAGTCCTATTT
ATCGAAAATAATCAGAAGATGGGCAGCCCTGTTCAGCAGATCACACAAACAGCACAACAAATGGTTCACTTTTCAGAGATTCGGGATTCACCGAACATCAGGTACGGGAGATCATTGTCAGAAACCCAACTATTCTATCTATTAAATTTGATCTGCGCTTGAAGCCCAAGATTCCGATGATGGGAACCGAACTGGGCCTC
CTTACTGAAGATGTGTTATGCGGAATATCCAGGTTGCTTATTAACAGTCTAGAGAAAGGGCAACTTGGTTTCTGCTGTATGACATTGGGAGGAAGGTGAAACCCAACGCGGATCTTCTGCAGCAATCCCGGGTTGAAGGAAGCACCCTGTAGTACTCAATACTTTAATGGATAAGATGCAGAAGATCATGGACTTCTTGA
TGCACACTGCTGGGCTTCCACCACAGATTGCTCTGACAACATCCTCCACTCTTAGGATTAAGGCTCACCAAATGATGTTAAAGTCTACAAGTGCAATGCAAGTTTCCGAGTGTCTTTCTTGTGTTGCTTCTTTGCTTGCTTTAATCAAGCAAAAATTGTTTGACAGGAATAGAAACTTGAGGAAGTTGTTGGAGGATTCT
GTTTCTTTCAGGGTTGGATTTTCTATTCACTTGAAATAATTAGGCTGCATCAAGAAAGGTATCATAATTCAGTTCAGGTCGGGCTCTTAGTGATCTTGTTTTAACTAGCCTACTATTTCAAATCAATCTCCCATTGCCAATCAATTGAGATTCTTGAAGGATACTGGTGTAGTACAGGCTCAAGGAAATACATTCTTGGA
ACACATCATATAACATTATTGAACAATGGAAAGAGAAACTCTTGGTGAGGATTTGTGGTTTGTGATTAAATTTGCTACTGTCAAGCATTGCTCCCTCAACTTCAAATATGATAATTACAG
>TRINITY_DN42636_c1_g1_i1 from sample A9 / Example unspliced isoform:TCCTTGACTATAAGGCCGTGTGGGGTTCTCATCATGAGCTTGGGCATTAACCATATTCTCATCATTCTCATCATTTTAATCTTGGGTTTCAACTGCCGATCAAATTATAAGATATTGAATTTGGATTTCTCTTACAATGATATTCCTTACCTGGTCTTCTGTGAATCCATGTCTTGGAAGCGCTGAACCGCTCGTTGTGC
TGTTTGGATGGATCTGCCCTGATAATGGTTTGTTCATCAATACACTTCTCCAAGCTATTCATCTAAAAGCAATCCTCTCATAATCCCTTTCATTCATCTGTAGTTTGTTAACAATGTTATGTTGTTTTCGTGTTCGATTCATTCATTCTCAACAAACAAAACCCCACATTGCCTTGCCTGACTGATGCAATGGTTATCTT
CTCCAAGTACATTCCTTCTCTTCTTCACCTACTCGTTACTGCGGAACTATCAACCATTCCCACACTTCACTTCGTTCAAGCTATCATTCTTCTCCACCGACACCCGCCAACAAACCCCCACAAGCAGAGTAGGCACACGCTGACCACAATCCCTGTTCAGATTTCTTACTTAACGAATGTGGCTTGTCTGAGTCCTATTT
ATCGAAAATAATCAGAAGATGGGCAGCCCTGTTCAGCAGATCACACAAACAGCACAACAAATGGTTCACTTTTCAGAGATTCGGGATTCACCGAACATCAGGTACGGGAGATCATTGTCAGAAACCCAACTATTCTATCTATTAAATTTGATCTGCGCTTGAAGCCCAAGATTCCGATGATGGGAACCGAACTGGGCCTC
CTTACTGAAGATGTGTTATGCGGAATATCCAGGTTGCTTATTAACAGTCTAGAGAAAGGGCAACTTGGTTTCTGCTGTATGACATTGGGAGGAAGGTGAAACCCAACGCGGATCTTCTGCAGCAATCCCGGGTTGAAGgtgagttacttctgttcttaatatcaagatccccccagtaagccaaagtgcaaacttattga
agttcaaaattaatatgtgagaaatatgggtattgtggagggctaaataacatttgcatattctctgttggtaactacaacgggcatgaaatttttgaatagaatttgaagtatttggcaagttttgtcctcctggaagatgaatttaaagatcttatcagGAAGCACCCTGTAGTACTCAATACTTTAATGGATAAGAT
GCAGAAGATCATGGACTTCTTGATGCACACTGCTGGGCTTCCACCACAGATTGCTCTGACAACATCCTCCACTCTTAGGATTAAGGCTCACCAAATGATGTTAAAGTCTACAAGTGCAATGCAAGTTTCCGAGTGTCTTTCTTGTGTTGCTTCTTTGCTTGCTTTAATCAAGCAAAAATTGTTTGACAGGAATAGAAACT
TGAGGAAGTTGTTGGAGGATTCTGTTTCTTTCAGGGTTGGATTTTCTATTCACTTGAAATAATTAGGCTGCATCAAGAAAGGTATCATAATTCAGTTCAGGTCGGGCTCTTAGTGATCTTGTTTTAACTAGCCTACTATTTCAAATCAATCTCCCATTGCCAATCAATTGAGATTCTTGAAGGATACTGGTGTAGTACAG
GCTCAAGGAAATACATTCTTGGAACACATCATATAACATTATTGAACAATGGAAAGAGAAACTCTTGGTGAGGATTTGTGGTTTGTGATTAAATTTGCTACTGTCAAGCATTGCTCCCTCAACTTCAAATATGATAATTACAG