SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3504 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30704050 Prunus avium Pav_sc0001405.1.:770224-770759 (-) noncoding (-0.405504)- 63 9.96 1
CNT30704049 Prunus avium Pav_sc0000212.1.:522185-522564 (+) noncoding (-0.0004096)3e-18 (sp|P93834|HXK2_ARATH) 47 0 2
CNT30704048 Prunus avium Pav_sc0000212.1.:139962-140479 (+) noncoding (-0.0008192)2e-64 (sp|O80345|CDKF1_ARATH) 59 0.75 2
CNT30704047 Prunus avium Pav_sc0000212.1.:452703-453447 (-) noncoding (-0.131072)- 66 0.19 2
CNT30704046 Prunus avium Pav_sc0000212.1.:676077-676557 (+) noncoding (-0.0004096)4e-19 (sp|Q9SI06|Y5573_ARATH) - 4.7 2
CNT30704045 Prunus avium Pav_sc0000212.1.:802680-803632 (-) noncoding (-0.04096)2e-38 (sp|Q9SU94|ANM11_ARATH) 76 44.32 2
CNT30704044 Prunus avium Pav_sc0000212.1.:77149-80144 (+) noncoding (-0.069632)- 59 7.18 1
CNT30704043 Prunus avium Pav_sc0000212.1.:55088-55975 (-) noncoding (-0.0684032)5e-52 (sp|Q9LHF1|LRX4_ARATH) 71 76.9 2
CNT30704042 Prunus avium Pav_sc0000212.1.:392281-395085 (+) noncoding (-0.04096)- 93 7.93 5
CNT30704041 Prunus avium Pav_sc0000212.1.:513206-518879 (-) coding (0.001)3e-35 (sp|Q7FZR1|RLP52_ARATH) 60 1.25 2
CNT30704040 Prunus avium Pav_sc0000212.1.:507163-514261 (-) noncoding (-0.0004096)6e-40 (sp|Q7FZR1|RLP52_ARATH) 75 21.54 2
CNT30704039 Prunus avium Pav_sc0000212.1.:700489-701591 (-) noncoding (-0.167936)- 68 2.64 2
CNT30704038 Prunus avium Pav_sc0000212.1.:414808-415500 (-) noncoding (-0.0004096)0.000000000000009 (sp|Q8S8N9|GOGC1_ARATH) 41 8.1 2
CNT30704037 Prunus avium Pav_sc0000212.1.:391169-397523 (+) noncoding (-0.0004096)- 39 8.85 2
CNT30704036 Prunus avium Pav_sc0000800.1.:353140-354218 (-) noncoding (-0.004096)5e-22 (sp|P59082|LFS_ALLCE) 83 59.28 2
CNT30704035 Prunus avium Pav_sc0000800.1.:352540-353987 (-) noncoding (-0.004096)4e-23 (sp|P59082|LFS_ALLCE) 48 11.99 2
CNT30704034 Prunus avium Pav_sc0000800.1.:17895-18156 (+) noncoding (-0.0004096)- 45 4.45 1
CNT30704033 Prunus avium Pav_sc0000800.1.:214773-216232 (-) noncoding (-0.192512)- 53 292.22 1
CNT30704032 Prunus avium Pav_sc0000800.1.:864824-865423 (+) noncoding (-0.045056)- - 4 2
CNT30704031 Prunus avium Pav_sc0000800.1.:417446-417699 (-) noncoding (-0.0540672)0.00000009 (sp|Q9FJG9|RUG3_ARATH) 84 77.61 1
CNT30704029 Prunus avium Pav_sc0000800.1.:864824-865423 (+) coding (0.211)- - 22 2
CNT30704028 Prunus avium Pav_sc0000800.1.:64695-65939 (+) noncoding (-0.0016384)- 52 53.67 1
CNT30704027 Prunus avium Pav_sc0000800.1.:17895-22550 (-) noncoding (-0.147456)- 35 14.12 2
CNT30704026 Prunus avium Pav_sc0000103.1.:174335-175103 (+) noncoding (-0.028672)- 82 6.42 2
CNT30704025 Prunus avium Pav_sc0000103.1.:10652-11657 (-) noncoding (-0.0069632)- 79 71.09 1
CNT30704024 Prunus avium Pav_sc0000103.1.:706146-706905 (+) noncoding (-0.032768)- 53 4.53 2
CNT30704023 Prunus avium Pav_sc0000103.1.:934368-934620 (-) noncoding (-0.0004096)- 32 21.35 1
CNT30704022 Prunus avium Pav_sc0000103.1.:971897-973928 (+) noncoding (-0.176128)- 91 5.12 2
CNT30704021 Prunus avium Pav_sc0000103.1.:118726-119355 (-) coding (0.486)- 76 0.19 2
CNT30704020 Prunus avium Pav_sc0000103.1.:867120-867912 (+) noncoding (-0.0884736)1e-97 (sp|Q9FX21|STT3B_ARATH) 65 0.42 2
CNT30704019 Prunus avium Pav_sc0000103.1.:131187-131560 (-) noncoding (-0.1286144)5e-26 (sp|P10978|POLX_TOBAC) 38 18.73 1
CNT30704018 Prunus avium Pav_sc0000103.1.:724340-724900 (+) noncoding (-0.036864)1e-50 (sp|P92996|GL120_ARATH) 58 3.91 2
CNT30704017 Prunus avium Pav_sc0000554.1.:1067776-1073183 (+) coding (0.096)5e-176 (sp|Q9LZ72|KCS19_ARATH) 56 6.25 2
CNT30704016 Prunus avium Pav_sc0000554.1.:1071467-1073183 (+) coding (0.096)3e-168 (sp|Q9LZ72|KCS19_ARATH) 55 6.93 2
CNT30704015 Prunus avium Pav_sc0000554.1.:1117211-1117637 (-) noncoding (-0.0004096)1e-19 (sp|A5HBK6|CFI_PYRCO) 46 42.25 2
CNT30704014 Prunus avium Pav_sc0000554.1.:450994-452334 (-) noncoding (-0.016384)- 77 40.93 1
CNT30704013 Prunus avium Pav_sc0000554.1.:725878-727177 (-) coding (0.122)8e-90 (sp|O04469|ECI1_ARATH) 72 53.28 1
CNT30704012 Prunus avium Pav_sc0000554.1.:400244-402431 (+) noncoding (-0.0004096)- 65 6.14 2
CNT30704010 Prunus avium Pav_sc0000554.1.:818365-819175 (+) noncoding (-0.018432)- 40 161.64 1
CNT30704008 Prunus avium Pav_sc0000554.1.:12014-12398 (-) noncoding (-0.065536)- 81 0.85 2
CNT30704007 Prunus avium Pav_sc0000554.1.:400172-404193 (+) noncoding (-0.0004096)- 56 12.2 2
CNT30704006 Prunus avium Pav_sc0000554.1.:1122941-1125346 (-) noncoding (-0.053248)0 (sp|O80623|Y2393_ARATH) 66 17.18 2
CNT30704004 Prunus avium Pav_sc0000554.1.:438032-443437 (-) coding (0.001)2e-25 (sp|P92519|M810_ARATH) 82 26.57 2
CNT30704003 Prunus avium Pav_sc0000554.1.:686830-687189 (+) noncoding (-0.589824)2e-18 (sp|P80497|ATP6_SOLTU) 68 2.78 2
CNT30704002 Prunus avium Pav_sc0000554.1.:560845-577984 (+) noncoding (-0.012288)0.000000000000003 (sp|Q03684|BIP4_TOBAC) 35 7.15 2
CNT30704001 Prunus avium Pav_sc0000554.1.:877830-881566 (+) noncoding (-0.012288)- 62 3.5 2
CNT30704000 Prunus avium Pav_sc0000554.1.:203140-205151 (+) noncoding (-0.053248)- - 1.72 2
CNT30703999 Prunus avium Pav_sc0000554.1.:402739-403353 (+) noncoding (-0.012288)- 47 14.47 1
CNT30703998 Prunus avium Pav_sc0000554.1.:804470-812090 (+) noncoding (-0.004096)- 40 0.45 2
CNT30703997 Prunus avium Pav_sc0000220.1.:320466-321399 (-) noncoding (-0.0720896)- 60 11.04 2