SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30510334 Solanum lycopersicum 7:4015658-4044944 (+) noncoding (-0.049152)- 31 20.05 3Conserved counterparts:
CNT30510333 Solanum lycopersicum 7:55999664-56002100 (+) noncoding (-0.0004096)- 49 1.71 1
CNT30510332 Solanum lycopersicum 7:7728223-7728582 (-) noncoding (-0.0004096)- - 23.13 1
CNT30510331 Solanum lycopersicum 7:56906446-56909591 (-) noncoding (-0.004096)- 81 3.59 2
CNT30510330 Solanum lycopersicum 7:47291959-47293633 (+) coding (0.101)- 45 6.02 2
CNT30510329 Solanum lycopersicum 7:63671183-63674807 (-) noncoding (-0.0004096)- - 14 2
CNT30510328 Solanum lycopersicum 7:28412084-28418695 (+) noncoding (-0.0004096)- 30 6.69 2
CNT30510327 Solanum lycopersicum 7:30820082-30822083 (+) noncoding (-0.0004096)- 71 5.88 2
CNT30510326 Solanum lycopersicum 7:46596489-46601185 (-) noncoding (-0.0004096)- 40 15.92 2
CNT30510325 Solanum lycopersicum 7:23215968-23216926 (+) noncoding (-0.0004096)- - 30.36 2
CNT30510324 Solanum lycopersicum 7:4011190-4044944 (+) noncoding (-0.0311296)- 53 13.82 3Conserved counterparts:
CNT30510323 Solanum lycopersicum 7:13472950-13473608 (+) noncoding (-0.1400832)- 70 37.61 1
CNT30510322 Solanum lycopersicum 7:58661675-58663615 (+) noncoding (-0.0004096)- 42 18.8 2
CNT30510321 Solanum lycopersicum 7:27929132-27937168 (-) noncoding (-0.0188416)- 84 21.1 6
CNT30510320 Solanum lycopersicum 7:36668481-36709019 (+) noncoding (-0.022528)- 73 3.28 2
CNT30510319 Solanum lycopersicum 7:53348499-53349038 (+) noncoding (-0.032768)- 78 7.02 1
CNT30510318 Solanum lycopersicum 7:29199219-29224478 (+) noncoding (-0.0004096)- 49 4.04 2
CNT30510316 Solanum lycopersicum 7:49763378-49778836 (-) noncoding (-0.0352256)- 36 20.35 4Conserved counterparts:
CNT30510315 Solanum lycopersicum 7:8725043-8725673 (-) noncoding (-0.032768)- 33 203.02 2Conserved counterparts:
CNT30510314 Solanum lycopersicum 7:7996667-7998128 (-) noncoding (-0.0004096)- 78 4.45 2
CNT30510313 Solanum lycopersicum 7:15534236-15581428 (-) noncoding (-0.0004096)- 42 2.56 2Conserved counterparts:
CNT30510312 Solanum lycopersicum 7:53691468-53695189 (+) noncoding (-0.032768)- 87 34.62 1
CNT30510311 Solanum lycopersicum 7:4586543-4590646 (-) noncoding (-0.0172032)- - 17.1 4
CNT30510310 Solanum lycopersicum 7:4037309-4040897 (+) noncoding (-0.0221184)0.000002 (sp|P86972|DEF1_NIGSA) 48 1.08 2Conserved counterparts:
CNT30510309 Solanum lycopersicum 7:51472191-51473548 (-) noncoding (-0.053248)- 86 6.43 2
CNT30510308 Solanum lycopersicum 7:67566244-67566521 (+) noncoding (-0.090112)3e-38 (sp|P36181|HSP80_SOLLC) 38 2.37 2Conserved counterparts:
CNT30510307 Solanum lycopersicum 7:54724646-54725858 (+) noncoding (-0.0536576)- 71 4.94 2
CNT30510306 Solanum lycopersicum 7:23344018-23358316 (+) noncoding (-0.008192)- 75 5.48 2
CNT30510305 Solanum lycopersicum 7:30547890-30575620 (+) noncoding (-0.0790528)- 46 6.8 3
CNT30510304 Solanum lycopersicum 7:4018859-4044941 (+) noncoding (-0.0360448)0.000005 (sp|C0HJZ1|DEF3_ARAHY) 31 17.49 2Conserved counterparts:
CNT30510303 Solanum lycopersicum 7:4899212-4901357 (-) noncoding (-0.0008192)- 79 0.85 4
CNT30510302 Solanum lycopersicum 7:54724646-54726529 (+) noncoding (-0.0004096)- 71 7.63 1
CNT30510301 Solanum lycopersicum 7:51057983-51070082 (-) coding (0.173)- 84 2.37 3Conserved counterparts:
CNT30510299 Solanum lycopersicum 7:49629596-49640460 (+) noncoding (-0.006144)- 93 43.2 4
CNT30510298 Solanum lycopersicum 7:63729124-63734144 (-) noncoding (-0.0004096)1e-27 (sp|Q8RWZ5|SD25_ARATH) 98 4.24 2
CNT30510297 Solanum lycopersicum 7:55587917-55588128 (-) noncoding (-0.0004096)0.000000000000009 (sp|P10978|POLX_TOBAC) 53 401.6 1
CNT30510296 Solanum lycopersicum 7:7726349-7728582 (+) noncoding (-0.012288)- 79 6.87 3
CNT30510295 Solanum lycopersicum 7:4873703-4880216 (+) noncoding (-0.028672)- 85 6.38 3
CNT30510294 Solanum lycopersicum 7:36616310-36632872 (+) noncoding (-0.0151552)0.0000000000004 (sp|P31843|RRPO_OENBE) 83 4.55 3
CNT30510293 Solanum lycopersicum 7:21221188-21227993 (-) noncoding (-0.1335296)- - 12.56 3
CNT30510292 Solanum lycopersicum 7:1460730-1464347 (-) noncoding (-0.118784)- 72 5.96 3
CNT30510291 Solanum lycopersicum 7:44273205-44280906 (+) noncoding (-0.04096)- 68 13.33 3
CNT30510290 Solanum lycopersicum 7:34582976-34591268 (-) noncoding (-0.0004096)- 46 4.44 2
CNT30510289 Solanum lycopersicum 7:10612740-10615911 (+) noncoding (-0.11264)- 54 4.63 2
CNT30510288 Solanum lycopersicum 7:55837649-55842650 (+) noncoding (-0.0004096)- - 7.43 2
CNT30510287 Solanum lycopersicum 7:23797114-23798944 (+) noncoding (-0.0004096)- - 10.78 2
CNT30510286 Solanum lycopersicum 7:65651733-65669107 (-) noncoding (-0.0004096)- 65 28.73 3Conserved counterparts:
CNT30510285 Solanum lycopersicum 7:64878856-64879937 (+) noncoding (-0.07168)- 32 28.29 2
CNT30510284 Solanum lycopersicum 7:40823952-40829157 (-) noncoding (-0.0004096)- 33 1.42 4
CNT30510283 Solanum lycopersicum 7:64877692-64880235 (+) noncoding (-0.1363968)- - 96.62 2