SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30524529 Setaria italica VIII:32274719-32275032 (+) noncoding (-0.0004096)- 44 0.58 1
CNT30524528 Setaria italica VIII:8836134-8836905 (+) coding (0.284)7e-33 (sp|Q9XF89|CB5_ARATH) 33 0 3Conserved counterparts:
CNT30524526 Setaria italica VIII:19923223-19927663 (+) coding (0.132)- 48 10.23 5
CNT30524524 Setaria italica VIII:7811299-7812531 (-) coding (0.208)- - 5.13 1
CNT30524523 Setaria italica VIII:40152641-40153088 (+) coding (0.166)- 89 0.83 2
CNT30524521 Setaria italica VIII:1694833-1697653 (-) noncoding (-0.0372736)1e-42 (sp|Q9FGZ9|UBL5_ARATH) 71 109 2
CNT30524520 Setaria italica VIII:8953992-8954435 (+) noncoding (-0.0086016)- 87 0.61 2
CNT30524519 Setaria italica VIII:669747-671405 (+) noncoding (-0.0548864)- 47 4.58 2
CNT30524518 Setaria italica VIII:21292929-21293257 (+) noncoding (-0.065536)- - 9.08 2
CNT30524517 Setaria italica VIII:33545077-33545465 (-) noncoding (-0.0688128)- 90 1.37 2
CNT30524516 Setaria italica VIII:13817168-13818244 (-) noncoding (-0.0454656)- 32 6.78 2
CNT30524515 Setaria italica VIII:32689638-32690343 (-) noncoding (-0.0765952)- 91 21.45 2
CNT30524514 Setaria italica VIII:14398620-14402564 (-) noncoding (-0.1744896)5e-79 (sp|Q53QK0|Y1103_ORYSJ) 62 0.38 3
CNT30524513 Setaria italica VIII:1365785-1377620 (+) noncoding (-0.0458752)2e-27 (sp|O81069|Y2899_ARATH) 84 0.95 3
CNT30524512 Setaria italica VIII:40330750-40347850 (+) coding (0.136)0.0000000008 (sp|Q6L3X3|R1B8_SOLDE) 95 0.37 2
CNT30524507 Setaria italica VIII:10760421-10762998 (-) noncoding (-0.0253952)- 42 309.99 2
CNT30524505 Setaria italica VIII:8978367-8999802 (-) noncoding (-0.094208)- 85 7.18 2
CNT30524504 Setaria italica VIII:28088420-28088706 (+) noncoding (-0.04096)- 51 0.28 1
CNT30524503 Setaria italica VIII:39758089-39759642 (+) coding (0.06)4e-50 (sp|Q53NK6|MYBA1_ORYSJ) 51 3.84 3Conserved counterparts:
CNT30524502 Setaria italica VIII:1366214-1377168 (+) noncoding (-0.057344)0.0000000004 (sp|Q9LSE1|CDG1_ARATH) - 2.93 2
CNT30524501 Setaria italica VIII:20237247-20237932 (-) coding (0.445)- 51 53.28 2
CNT30524500 Setaria italica VIII:33752435-33758624 (+) coding (0.062)0.00000000000003 (sp|P06678|ZEAA_MAIZE) 98 123.54 4
CNT30524499 Setaria italica VIII:32818711-32818936 (+) noncoding (-0.0004096)- 36 3.34 1
CNT30524498 Setaria italica VIII:38963912-38978949 (-) noncoding (-0.0016384)0.0000007 (sp|Q7XBQ9|RGA2_SOLBU) 81 0.61 2Conserved counterparts:
CNT30524497 Setaria italica VIII:31769172-31770787 (+) noncoding (-0.0233472)- 54 6.34 2
CNT30524495 Setaria italica VIII:38914245-38914978 (+) noncoding (-0.053248)- 85 0.85 2
CNT30524492 Setaria italica VIII:39726097-39740494 (+) noncoding (-0.014336)2e-49 (sp|Q7XA39|RGA4_SOLBU) 95 1.92 2
CNT30524491 Setaria italica VIII:913923-915071 (-) coding (0.068)- 90 7.74 1
CNT30524489 Setaria italica VIII:1365785-1377576 (+) noncoding (-0.0458752)- 84 0.62 2
CNT30524487 Setaria italica VIII:4328209-4330211 (+) coding (0.316)- 92 1.36 4Conserved counterparts:
CNT30524486 Setaria italica VIII:38963089-38978006 (-) noncoding (-0.749568)4e-31 (sp|Q7XBQ9|RGA2_SOLBU) 59 0.22 2Conserved counterparts:
CNT30524483 Setaria italica VIII:13111653-13115260 (+) noncoding (-0.0004096)- 44 2.08 2
CNT30524481 Setaria italica VIII:31025068-31025461 (+) noncoding (-0.0008192)- 63 9.96 1
CNT30524479 Setaria italica VIII:8080684-8081217 (-) coding (0.476)- 83 20.74 1
CNT30524478 Setaria italica VIII:25980469-25981456 (-) coding (0.048)- 74 14.18 1
CNT30524475 Setaria italica VIII:34058525-34058979 (-) noncoding (-0.0888832)- 100 14.19 2
CNT30524474 Setaria italica VIII:31843679-31844344 (+) noncoding (-0.077824)- 68 5 3
CNT30524473 Setaria italica VIII:12079884-12085296 (+) coding (0.207)- 81 13.76 2
CNT30524472 Setaria italica VIII:40304351-40355433 (+) coding (0.411)0.000000002 (sp|P0DO10|PIKS2_ORYSJ) 97 0.67 2
CNT30524471 Setaria italica VIII:31824673-31825223 (-) noncoding (-0.1171456)- 61 10.77 1
CNT30524468 Setaria italica VIII:36830551-36830918 (+) noncoding (-0.108544)- 49 11.86 2
CNT30524466 Setaria italica VIII:31591549-31592297 (+) coding (0.114)- 91 1.93 2
CNT30524465 Setaria italica VIII:28633476-28634300 (-) noncoding (-0.1056768)- 59 35.95 2
CNT30524464 Setaria italica VIII:20770559-20772176 (-) noncoding (-0.0626688)- 82 46.02 3
CNT30524463 Setaria italica VIII:5294849-5298189 (-) noncoding (-0.036864)- 72 6.63 3
CNT30524462 Setaria italica VIII:21204430-21293703 (+) noncoding (-0.1765376)- 75 691.14 2
CNT30524461 Setaria italica VIII:3989756-3990310 (+) coding (0.119)- 96 28.49 2
CNT30524460 Setaria italica VIII:1371685-1377143 (+) noncoding (-0.012288)2e-31 (sp|Q1MX30|XA21_ORYSI) 33 63.68 2
CNT30524459 Setaria italica VIII:7430645-7443873 (+) coding (0.16)4e-16 (sp|Q10J94|CYT8_ORYSJ) 84 524.91 2
CNT30524458 Setaria italica VIII:10725887-10727228 (+) coding (0.231)- 93 4.62 2