SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 8440 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3099392 Solanum tuberosum 00:40464894-40466537 (-) noncoding (-0.0004096)- 42 11.99 1
CNT3099390 Solanum tuberosum 00:33990568-34006768 (+) noncoding (-0.0004096)0.0000000000002 (sp|C0LGP4|Y3475_ARATH) - 11.23 2
CNT3099389 Solanum tuberosum 00:42345445-42346700 (+) noncoding (-0.0004096)- - 13.35 1
CNT3099388 Solanum tuberosum 00:21289702-21290691 (+) noncoding (-0.0004096)- 46 9.32 2
CNT3099387 Solanum tuberosum 00:39031688-39032716 (-) noncoding (-0.0004096)- 47 4.69 1
CNT3099386 Solanum tuberosum 00:44589156-44589955 (-) noncoding (-0.0004096)- 50 7.84 1
CNT3099385 Solanum tuberosum 00:47633384-47633837 (-) noncoding (-0.024576)- 65 27.19 2
CNT3099384 Solanum tuberosum 00:19645860-19649255 (+) noncoding (-0.0598016)- 38 11.87 3
CNT3099383 Solanum tuberosum 00:22838288-22862610 (-) noncoding (-0.0004096)1e-36 (sp|Q5MR23|9DC3_SOLPI) 44 0.4 2
CNT3099382 Solanum tuberosum 00:39466608-39468288 (-) noncoding (-0.0004096)- - 177.07 2
CNT3099380 Solanum tuberosum 00:47820057-47820497 (-) noncoding (-0.0004096)- 45 60.12 1
CNT3099378 Solanum tuberosum 00:5334172-5337007 (-) noncoding (-0.180224)- 37 8.72 2
CNT3099377 Solanum tuberosum 00:15287578-15313209 (+) noncoding (-0.016384)- 76 1.63 3
CNT3099376 Solanum tuberosum 00:15304673-15304918 (-) noncoding (-0.028672)- 81 7 1
CNT3099375 Solanum tuberosum 00:34948601-34953708 (-) noncoding (-0.036864)- - 16.79 2
CNT3099374 Solanum tuberosum 00:25516357-25517103 (-) noncoding (-0.057344)- 38 0.76 1
CNT3099373 Solanum tuberosum 00:7274999-7288652 (-) noncoding (-0.0126976)- 66 2.78 8
CNT3099372 Solanum tuberosum 00:1267197-1267977 (+) noncoding (-0.0004096)- - 79.35 2
CNT3099371 Solanum tuberosum 00:5311633-5318861 (-) noncoding (-0.0004096)- 46 1.98 3
CNT3099370 Solanum tuberosum 00:43271843-43272659 (-) noncoding (-0.012288)- 42 7.85 2
CNT3099369 Solanum tuberosum 00:25900966-25901365 (-) noncoding (-0.0004096)- 37 2.89 1
CNT3099368 Solanum tuberosum 00:48324731-48325128 (+) noncoding (-0.159744)- - 1.73 1
CNT3099367 Solanum tuberosum 00:36433828-36443124 (+) noncoding (-0.0004096)- 55 17.01 4
CNT3099366 Solanum tuberosum 00:29532174-29532969 (-) noncoding (-0.069632)0.000000003 (sp|Q9LIR8|FBK67_ARATH) 43 83.47 2
CNT3099365 Solanum tuberosum 00:21243702-21245015 (+) noncoding (-0.14336)0.000000000000004 (sp|Q9SSK5|MLP43_ARATH) 56 53.91 2
CNT3099364 Solanum tuberosum 00:36854360-36854627 (-) noncoding (-0.0004096)- - 11.99 1
CNT3099363 Solanum tuberosum 00:38002645-38006231 (-) noncoding (-0.0237568)2e-141 (sp|P07370|CB2B_SOLLC) 69 424.46 3Conserved counterparts:
CNT3099361 Solanum tuberosum 00:45217503-45218234 (+) noncoding (-0.0004096)- 58 18.42 1
CNT3099360 Solanum tuberosum 00:25223283-25244212 (+) coding (0.336)- 90 8.88 2Conserved counterparts:
CNT3099359 Solanum tuberosum 00:22836205-22855829 (-) noncoding (-0.0004096)0.0000000000001 (sp|Q9C699|RLP7_ARATH) 55 2.13 3
CNT3099358 Solanum tuberosum 00:1437238-1438022 (-) noncoding (-0.0004096)- 53 59.93 2
CNT3099357 Solanum tuberosum 00:20855252-20947153 (-) noncoding (-0.049152)1e-104 (sp|Q40392|TMVRN_NICGU) 66 5.09 2
CNT3099356 Solanum tuberosum 00:26861021-26883419 (-) noncoding (-0.0004096)8e-65 (sp|O49879|CF0_SOLLC) 45 4.93 2
CNT3099355 Solanum tuberosum 00:13151059-13156418 (-) noncoding (-0.036864)- 64 7.4 7
CNT3099354 Solanum tuberosum 00:1369071-1369522 (+) noncoding (-0.0004096)- 52 26.17 2
CNT3099353 Solanum tuberosum 00:9834518-9836485 (+) noncoding (-0.090112)- 58 2.57 2
CNT3099352 Solanum tuberosum 00:31004428-31006093 (+) noncoding (-0.0004096)- 99 10.56 2
CNT3099350 Solanum tuberosum 00:7274851-7289857 (-) noncoding (-0.0126976)- 66 5.76 9
CNT3099349 Solanum tuberosum 00:25243191-25243712 (+) noncoding (-0.0528384)- 85 112.97 1
CNT3099348 Solanum tuberosum 00:22804716-22855046 (-) noncoding (-0.045056)3e-19 (sp|C0LGS2|Y4361_ARATH) - 8.93 3
CNT3099347 Solanum tuberosum 00:47918397-47918828 (+) noncoding (-0.0004096)- 80 15.6 1
CNT3099346 Solanum tuberosum 00:35470123-35473233 (+) noncoding (-0.0004096)- 43 46 3
CNT3099345 Solanum tuberosum 00:23046179-23046491 (-) noncoding (-0.0004096)- 34 9.45 1
CNT3099344 Solanum tuberosum 00:35167023-35170577 (+) noncoding (-0.028672)- 43 17.57 3
CNT3099343 Solanum tuberosum 00:31672417-31673713 (-) noncoding (-0.0004096)- - 19.36 2
CNT3099342 Solanum tuberosum 00:5346072-5349950 (-) noncoding (-0.0004096)- 90 1.4 4
CNT3099341 Solanum tuberosum 00:24873234-24933776 (-) noncoding (-0.069632)2e-74 (sp|Q5MR23|9DC3_SOLPI) 44 4.46 3
CNT3099340 Solanum tuberosum 00:31440413-31442095 (-) coding (0.107)5e-48 (sp|Q9LNG5|PPP7L_ARATH) 46 1.87 2
CNT3099339 Solanum tuberosum 00:52591741-52591961 (-) noncoding (-0.0004096)- - 5.62 1
CNT3099338 Solanum tuberosum 00:10599222-10599620 (+) noncoding (-0.1437696)- - 6.46 2