SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30511457 Solanum lycopersicum 11:30654170-30656184 (-) noncoding (-0.0135168)- 60 9.29 2
CNT30511456 Solanum lycopersicum 11:4437744-4438242 (+) noncoding (-0.0004096)- 55 12.99 1
CNT30511455 Solanum lycopersicum 11:8176283-8185312 (-) coding (0.085)- 71 10.54 2Conserved counterparts:
CNT30511454 Solanum lycopersicum 11:17193056-17198377 (-) noncoding (-0.0004096)- - 76.45 2
CNT30511453 Solanum lycopersicum 11:25914988-25917946 (-) noncoding (-0.0557056)- 69 36.85 1
CNT30511452 Solanum lycopersicum 11:8436987-8439151 (+) noncoding (-0.401408)- 38 15.68 2
CNT30511451 Solanum lycopersicum 11:5994376-5994694 (-) noncoding (-0.278528)- - 11.76 2
CNT30511450 Solanum lycopersicum 11:45474017-45474251 (+) noncoding (-0.0004096)- 53 59.56 1
CNT30511449 Solanum lycopersicum 11:32260595-32262566 (+) noncoding (-0.057344)- 69 30.16 3
CNT30511448 Solanum lycopersicum 11:28888528-28891082 (+) noncoding (-0.069632)- 34 19.03 3
CNT30511447 Solanum lycopersicum 11:28888557-28891203 (+) noncoding (-0.069632)- 39 8.42 3Conserved counterparts:
CNT30511446 Solanum lycopersicum 11:46992236-47000808 (+) noncoding (-0.090112)- 31 4.76 2
CNT30511444 Solanum lycopersicum 11:36350315-36361891 (+) noncoding (-0.1114112)- 45 2.51 2
CNT30511443 Solanum lycopersicum 11:52351038-52365825 (+) coding (0.302)- 82 15.4 2
CNT30511442 Solanum lycopersicum 11:43035276-43042330 (+) noncoding (-0.016384)- 88 19.48 1
CNT30511440 Solanum lycopersicum 11:17061506-17061776 (+) noncoding (-0.0401408)- 58 6.04 1
CNT30511438 Solanum lycopersicum 11:139535-140585 (-) coding (0.247)- 99 1.33 3
CNT30511437 Solanum lycopersicum 11:35719704-35722529 (+) noncoding (-0.0004096)- 50 5.01 2
CNT30511436 Solanum lycopersicum 11:3562912-3563884 (+) noncoding (-0.0069632)1e-111 (sp|Q9SJY5|PUMP5_ARATH) 75 57.48 2Conserved counterparts:
CNT30511435 Solanum lycopersicum 11:32325818-32326361 (-) noncoding (-0.0004096)- 51 10.64 2
CNT30511434 Solanum lycopersicum 11:38698650-38707305 (-) noncoding (-0.0004096)- 37 8.09 2
CNT30511432 Solanum lycopersicum 11:13156619-13159302 (-) noncoding (-0.0004096)- 35 9.5 3
CNT30511431 Solanum lycopersicum 11:55183156-55184214 (+) noncoding (-0.057344)- 51 9.25 2
CNT30511430 Solanum lycopersicum 11:26019577-26022691 (-) noncoding (-0.012288)- 49 8.17 2
CNT30511429 Solanum lycopersicum 11:5178182-5179357 (-) noncoding (-0.0598016)- 92 9.86 2
CNT30511427 Solanum lycopersicum 11:21339098-21339550 (+) noncoding (-0.2048)- 46 44.76 1Conserved counterparts:
CNT30511426 Solanum lycopersicum 11:4303580-4303937 (+) noncoding (-0.0004096)- - 162.23 1
CNT30511425 Solanum lycopersicum 11:20235528-20239971 (+) noncoding (-0.0004096)- 96 7.97 2
CNT30511424 Solanum lycopersicum 11:44140536-44141434 (-) noncoding (-0.0004096)- 47 4.68 2
CNT30511423 Solanum lycopersicum 11:3041000-3041346 (-) noncoding (-0.0004096)- 71 719.62 1
CNT30511421 Solanum lycopersicum 11:32231119-32233527 (+) noncoding (-0.0147456)- 87 2.9 2
CNT30511419 Solanum lycopersicum 11:12972364-12974316 (+) noncoding (-0.045056)- 72 17.39 1
CNT30511418 Solanum lycopersicum 11:13137092-13139489 (-) noncoding (-0.028672)- 46 11.72 1
CNT30511417 Solanum lycopersicum 11:52822297-52822504 (+) noncoding (-0.0004096)- 30 54.42 1
CNT30511416 Solanum lycopersicum 11:3667585-3669108 (-) noncoding (-0.0004096)- 46 186.65 2
CNT30511415 Solanum lycopersicum 11:43906184-43913560 (-) noncoding (-0.0004096)- 34 16.31 2
CNT30511413 Solanum lycopersicum 11:10099537-10101979 (-) noncoding (-0.26624)- 82 17.87 2
CNT30511412 Solanum lycopersicum 11:44753769-44756667 (-) noncoding (-0.0004096)- 96 31.94 2
CNT30511410 Solanum lycopersicum 11:10105663-10113050 (-) noncoding (-0.0663552)- 67 13.8 2
CNT30511409 Solanum lycopersicum 11:1813698-1816210 (+) noncoding (-0.036864)- - 15.03 6
CNT30511408 Solanum lycopersicum 11:5178550-5179307 (-) coding (0.638)- 59 3.85 2
CNT30511407 Solanum lycopersicum 11:25915421-25917953 (-) noncoding (-0.053248)- 61 13.82 2
CNT30511406 Solanum lycopersicum 11:30383555-30429255 (-) noncoding (-0.024576)- 63 9.61 2Conserved counterparts:
CNT30511405 Solanum lycopersicum 11:25106242-25106952 (-) noncoding (-0.0004096)- 36 6.01 2
CNT30511404 Solanum lycopersicum 11:31690561-31691734 (+) noncoding (-0.032768)- 70 43.61 2
CNT30511403 Solanum lycopersicum 11:10283895-10285738 (-) noncoding (-0.0004096)- 32 105.5 3
CNT30511402 Solanum lycopersicum 11:19446361-19466130 (-) noncoding (-0.012288)- 62 6.61 4
CNT30511399 Solanum lycopersicum 11:5178187-5179258 (-) coding (0.314)- 92 37.7 2
CNT30511398 Solanum lycopersicum 11:16784754-16787508 (-) noncoding (-0.0004096)- 30 3.64 2
CNT30511397 Solanum lycopersicum 11:43808697-43817432 (+) noncoding (-0.028672)- 60 5.75 2